RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ZC4H2Q9NQZ6 224 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 RAB29O14966 203 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 NDUFA5Q16718 116 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 CLEC9AQ6UXN8 241 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 RAB1CQ92928 201 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 NARFLQ9H6Q4 476 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 CYTL1Q9NRR1 136 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 MMP24Q9Y5R2 645 aa12.16□□□□□ -0.46
CDK5RAP3-218ENST00000580391 TET2Q6N021 2002 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 KIAA1324LA8MWY0 1029 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 P0C879 139 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 OR8B3Q8NGG8 313 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 DDB2Q92466 427 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 NEIL1Q96FI4 390 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 OR8B2Q96RD0 313 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 PLEKHA2Q9HB19 425 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 FBXL17Q9UF56 701 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 GAB2Q9UQC2 676 aa12.15□□□□□ -0.46
CDK5RAP3-218ENST00000580391 TMEM50AO95807 157 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 P2RY1P47900 373 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 WDR25Q64LD2 544 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 RBMXL1Q96E39 390 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 MIOXQ9UGB7 285 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 TACC2O95359 2948 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 WRBO00258 174 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 SCARB1Q8WTV0 552 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
CDK5RAP3-218ENST00000580391 FAM24AA6NFZ4 105 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 GPR137BO60478 399 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 IGHV1-8P0DP01 117 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 DLX1P56177 255 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 TMEM33P57088 247 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.474e-7■■■□□ 14.7
CDK5RAP3-218ENST00000580391 MIDNQ504T8 468 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 ZNF295-AS1Q8N0V1 137 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 ZNF383Q8NA42 475 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 CD300LFQ8TDQ1 290 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 R3HDM4Q96D70 268 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 S1PR3Q99500 378 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PRELID3BQ9Y3B1 194 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
CDK5RAP3-218ENST00000580391 IGSF23A1L1A6 192 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 C22orf46C9J442 243 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 CHST1O43916 411 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PVALBP20472 110 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 THBS3P49746 956 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 CAV2P51636 162 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 VAMP2P63027 116 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 OR2C3Q8N628 320 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 STOML3Q8TAV4 291 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 KLF2Q9Y5W3 355 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 FAM208BQ5VWN6 2430 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 RBFOX2O43251 390 aaKnown RBP eCLIP12.12□□□□□ -0.472e-11■□□□□ 9.3
CDK5RAP3-218ENST00000580391 ATG12O94817 140 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 HPRT1P00492 218 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 EFNA4P52798 201 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PAX9P55771 341 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 EWSR1Q01844 656 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 CLLU1Q5K131 121 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 RPL7L1Q6DKI1 246 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 GSX2Q9BZM3 304 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 LYRM2Q9NU23 88 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 ASH1LQ9NR48 2969 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-218ENST00000580391 CRYBG3Q68DQ2 2970 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 A0A087X0M5 115 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PPIAL4CA0A0B4J2A2 164 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 A0A1B0GX30 115 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 H3BP45 60 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 GPR37O15354 613 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 GOSR1O95249 250 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 PPIAL4GP0DN37 164 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 IAPPP10997 89 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 KIR2DS2P43631 304 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 NHLH2Q02577 135 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 TLE4Q04727 773 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 GPR157Q5UAW9 335 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 ZNF833PQ6ZTB9 187 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 VKORC1L1Q8N0U8 176 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 SESN1Q9Y6P5 492 aa12.11□□□□□ -0.47
CDK5RAP3-218ENST00000580391 J3QR06 171 aa12.1□□□□□ -0.47
CDK5RAP3-218ENST00000580391 OVOL3O00110 214 aa12.1□□□□□ -0.47
CDK5RAP3-218ENST00000580391 TOR1AO14656 332 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms