RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SLC25A46Q96AG3 418 aa19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 FLYWCH2Q96CP2 140 aaKnown RBP19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 KCTD12Q96CX2 325 aaKnown RBP19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 FBXL15Q9H469 300 aa19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 AUNIPQ9H7T9 357 aa19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 SLC35D1Q9NTN3 355 aa19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 IGHV7-81A0A0B4J1V7 117 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 SPDEFO95238 335 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 SMIM18P0DKX4 95 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 IGLL1P15814 213 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 CD33P20138 364 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 THBS3P49746 956 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 ARPC4P59998 168 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 NCS1P62166 190 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 SAMD12Q8N8I0 201 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 OR2W1Q9Y3N9 320 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 COL7A1Q02388 2944 aa19.49■□□□□ 0.71
CDC42EP4-205ENST00000580315 ATP6V0E1O15342 81 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 XRCC3O43542 346 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 IGHG4P01861 327 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 IGKV1-16P04430 117 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 LUMP51884 338 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 LINC00205P59089 165 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 VBP1P61758 197 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 CFHR3Q02985 330 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 PSG5Q15238 335 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 ZNF660Q6AZW8 331 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 BEST4Q8NFU0 473 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 ADTRPQ96IZ2 230 aa19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 METTL1Q9UBP6 276 aaKnown RBP19.48■□□□□ 0.71
CDC42EP4-205ENST00000580315 SLC22A5O76082 557 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 RRASP10301 218 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 NFYAP23511 347 aaPredicted RBP19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 CBX5P45973 191 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 RTL8BQ17RB0 113 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 VAX1Q5SQQ9 334 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 HOGA1Q86XE5 327 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 ZNF695Q8IW36 515 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 KLHL30-AS1Q8NEE0 82 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 MRPS26Q9BYN8 205 aaKnown RBP19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 WSB1Q9Y6I7 421 aa19.47■□□□□ 0.71
CDC42EP4-205ENST00000580315 TRAV41A0A0B4J266 112 aa19.46■□□□□ 0.71
CDC42EP4-205ENST00000580315 RPLP1P05386 114 aaKnown RBP19.46■□□□□ 0.71
CDC42EP4-205ENST00000580315 LGALS7P47929 136 aa19.46■□□□□ 0.71
CDC42EP4-205ENST00000580315 ZNF645Q8N7E2 425 aa19.46■□□□□ 0.71
CDC42EP4-205ENST00000580315 RNF152Q8N8N0 203 aa19.46■□□□□ 0.71
CDC42EP4-205ENST00000580315 J3QRK9 145 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 HLA-DQB1P01920 261 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 CX3CL1P78423 397 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 TMEM69Q5SWH9 247 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 TMEM65Q6PI78 240 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 ANKRD13BQ86YJ7 626 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 GVQW1Q8N7I0 195 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 ABHD5Q8WTS1 349 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 C5orf30Q96GV9 206 aa19.45■□□□□ 0.7
CDC42EP4-205ENST00000580315 G3V318 75 aa19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 K7EIL1 84 aa19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 DUTP33316 252 aaKnown RBP19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 C8orf86Q6ZUL3 223 aa19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 BVESQ8NE79 360 aa19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 ACOT12Q8WYK0 555 aa19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 CLCC1Q96S66 551 aa19.44■□□□□ 0.7
CDC42EP4-205ENST00000580315 TENM3Q9P273 2699 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 FCN1O00602 326 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 SLC25A17O43808 307 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 PSMB8P28062 276 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 PPIFP30405 207 aaKnown RBP19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 CDX1P47902 265 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 TMEM267Q0VDI3 215 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 ECSCRQ19T08 205 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 LCNL1Q6ZST4 164 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 C18orf65Q6ZTR6 163 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 HARBI1Q96MB7 349 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 IFT46Q9NQC8 304 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 COMMD3Q9UBI1 195 aa19.43■□□□□ 0.7
CDC42EP4-205ENST00000580315 SHOXO15266 292 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 GABARAPO95166 117 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 PTHLHP12272 177 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 MYCNOSP40205 109 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 RORCP51449 518 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 TAS2R20P59543 309 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 NDPQ00604 133 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 TMEM177Q53S58 311 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 ZNF562Q6V9R5 426 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 TCTEX1D1Q8N7M0 179 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 CMTM3Q96MX0 182 aa19.42■□□□□ 0.7
CDC42EP4-205ENST00000580315 SMIM31A0A1B0GVY4 71 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 TUSC2O75896 110 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 CA2P00918 260 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 CRIP2P52943 208 aaPredicted RBP19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 GPR107Q5VW38 600 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 ETV3LQ6ZN32 361 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 GPR141Q7Z602 305 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 PPP1R27Q86WC6 154 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 MINDY2Q8NBR6 621 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 DDB2Q92466 427 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 RCC1LQ96I51 464 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 RBMX2Q9Y388 322 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 PRELID3BQ9Y3B1 194 aa19.41■□□□□ 0.7
CDC42EP4-205ENST00000580315 A3GALT2U3KPV4 340 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms