RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SIGLECL1Q8N7X8 197 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 ZNF383Q8NA42 475 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 OR5AN1Q8NGI8 311 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 ADTRPQ96IZ2 230 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 SSX3Q99909 188 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 DPAGT1Q9H3H5 408 aa12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-212ENST00000580061 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 FAM240BA0A1B0GVZ2 78 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 H0YJW9 148 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 RLN1P04808 185 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 CD1BP29016 333 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 BRS3P32247 399 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 RAB13P51153 203 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 PIGPP57054 158 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 ABCA11PQ4W5N1 156 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 KCTD9Q7L273 389 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 PIFOQ8TCI5 191 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 DDB2Q92466 427 aa12.78□□□□□ -0.36
CSNK1D-212ENST00000580061 TCRBP04435 133 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 CD24P25063 80 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 S100GP29377 79 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 MC5RP33032 325 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 IER3P46695 156 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 CATR1Q13166 79 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 CCDC71LQ8N9Z2 235 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 ENKURQ8TC29 256 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 CAPSLQ8WWF8 208 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 COPZ2Q9P299 210 aa12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 TEP1Q99973 2627 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-212ENST00000580061 RNF212BA8MTL3 300 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 H3BUX3 64 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 MPPED1O15442 326 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 VENTXO95231 258 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 APOA2P02652 100 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 TAGLNQ01995 201 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 EBI3Q14213 229 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 FBLN7Q53RD9 439 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 RBMS3Q6XE24 437 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 TMED4Q7Z7H5 227 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 OR51H1Q8NH63 302 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 TCTEX1D2Q8WW35 142 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 RBMXL1Q96E39 390 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 SLC35D1Q9NTN3 355 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 FLVCR2Q9UPI3 526 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 WASHC3Q9Y3C0 194 aa12.76□□□□□ -0.37
CSNK1D-212ENST00000580061 H7C2Y5 167 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 HOXA3O43365 443 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 IGHV4-59P01825 116 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 FAM106CPP0CH98 169 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 F2RP25116 425 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 PDPNQ86YL7 162 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 CENPSQ8N2Z9 138 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 TCF19Q9Y242 345 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 NUBP2Q9Y5Y2 271 aa12.75□□□□□ -0.37
CSNK1D-212ENST00000580061 CRYM-AS1A6NIL9 109 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 FCGR3BO75015 233 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 PTTG1O95997 202 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 IGKV1-16P04430 117 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 RRASP10301 218 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 DHODHQ02127 395 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 RTL8BQ17RB0 113 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 OR2B11Q5JQS5 317 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 SLC25A42Q86VD7 318 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 OR2T10Q8NGZ9 312 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 OR5R1Q8NH85 324 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 ZNF418Q8TF45 676 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 EAF1Q96JC9 268 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 NAA60Q9H7X0 242 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 NUDT15Q9NV35 164 aa12.74□□□□□ -0.37
CSNK1D-212ENST00000580061 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 TEX13DA0A0J9YY54 714 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 C3orf85A0A1B0GTC6 90 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.371e-16■■■■■ 30.7
CSNK1D-212ENST00000580061 RAMP3O60896 148 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 MOSP00540 346 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 H2AFB2P0C5Z0 115 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 AKR1C4P17516 323 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
CSNK1D-212ENST00000580061 HES1Q14469 280 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms