RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 UBE2CO00762 179 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 NKX2-2O95096 273 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 MPC2O95563 127 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 SPINK2P20155 84 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 ANOS1P23352 680 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 ZNF880Q6PDB4 577 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 C17orf47Q8NEP4 570 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 MAP1LC3AQ9H492 121 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 PHLDA3Q9Y5J5 127 aa4.47□□□□□ -1.69
NF1-219ENST00000579081 ARFGEF1Q9Y6D6 1849 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 A0A0A6YYD5 115 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 hCG_38984A0A1B0GV85 526 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.46□□□□□ -1.69
NF1-219ENST00000579081 ATP5EP56381 51 aaPredicted RBP4.46□□□□□ -1.69
NF1-219ENST00000579081 SRSF6Q13247 344 aaKnown RBP4.46□□□□□ -1.69
NF1-219ENST00000579081 ZNF56Q15929 161 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 SPINK14Q6IE38 97 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 SF3B5Q9BWJ5 86 aaKnown RBP4.46□□□□□ -1.69
NF1-219ENST00000579081 CHST5Q9GZS9 411 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 CCL28Q9NRJ3 127 aa4.46□□□□□ -1.69
NF1-219ENST00000579081 BEX4Q9NWD9 120 aaPredicted RBP4.46□□□□□ -1.69
NF1-219ENST00000579081 PARP14Q460N5 1801 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 IGHV1OR21-1A0A087WYE8 117 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 A8MWL6 223 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 DIRC3C9JPN6 131 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 IGHV4-34P06331 123 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 KLF9Q13886 244 aaPredicted RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 PSG3Q16557 428 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 CFAP161Q6P656 301 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ASCL4Q6XD76 172 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 LRP10Q7Z4F1 713 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 RIMKLAQ8IXN7 391 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 SHISA5Q8N114 240 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ADAD2Q8NCV1 583 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 VN1R17PQ8TDU5 208 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 GPA33Q99795 319 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 FOXC2Q99958 501 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 LINC00470Q9BZP3 86 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 DNAJB12Q9NXW2 375 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 F5P12259 2224 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ACYP1P07311 99 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 INO80CQ6PI98 192 aaPredicted RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 C9orf62Q8N4C0 152 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 VSTM2LQ96N03 204 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 MRPL32Q9BYC8 188 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 HSF4Q9ULV5 492 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 CACNA1BQ00975 2339 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 DOCK9Q9BZ29 2069 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 SPTBN1Q01082 2364 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 TRBV20-1A0A075B6N2 111 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 A0A0B4J2E0 115 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 A0A1B0GX12 115 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 TMEM8BA6NDV4 472 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 TCF21O43680 179 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 NGFRP08138 427 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 MAGEA5P43359 124 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 DHRS2Q13268 280 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 FAM27D1Q5T7N8 215 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 PCSK4Q6UW60 755 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 GAPTQ8N292 157 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 V9GYH0 126 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 STRCP1A6NGW2 1772 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 KIAA1217Q5T5P2 1943 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ARID1BQ8NFD5 2236 aaPredicted RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 A0A0G2JMZ2 1700 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 LRRC37A2A6NM11 1700 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 LRRC37AA6NMS7 1700 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 CACNA1IQ9P0X4 2223 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 PSMB11A5LHX3 300 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 HTN3P15516 51 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 CD200R1LQ6Q8B3 271 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 TAF1LQ8IZX4 1826 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ROBO1Q9Y6N7 1651 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 FAM231BA6NCW3 169 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 RBMY1BA6NDE4 496 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 RBMY1EA6NEQ0 496 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 RBMY1DP0C7P1 496 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 RBMY1A1P0DJD3 496 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 RBMY1CP0DJD4 496 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 COX5BP10606 129 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 RAC3P60763 192 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 RPS4XP62701 263 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 SLC25A34Q6PIV7 304 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ANKRD33Q7Z3H0 272 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 MAVSQ7Z434 540 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 ZNF714Q96N38 554 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 SEPSECSQ9HD40 501 aaKnown RBP4.46□□□□□ -1.7
NF1-219ENST00000579081 SLC25A37Q9NYZ2 338 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 NEU3Q9UQ49 428 aa4.46□□□□□ -1.7
NF1-219ENST00000579081 A0A1W2PPE3 182 aa4.45□□□□□ -1.7
NF1-219ENST00000579081 PLPP3O14495 311 aa4.45□□□□□ -1.7
NF1-219ENST00000579081 MPZL1O95297 269 aa4.45□□□□□ -1.7
NF1-219ENST00000579081 LY6EQ16553 131 aa4.45□□□□□ -1.7
NF1-219ENST00000579081 ZNF784Q8NCA9 323 aaPredicted RBP4.45□□□□□ -1.7
NF1-219ENST00000579081 HDHD3Q9BSH5 251 aaPredicted RBP4.45□□□□□ -1.7
NF1-219ENST00000579081 CISD1Q9NZ45 108 aaKnown RBP4.45□□□□□ -1.7
NF1-219ENST00000579081 SMAD7O15105 426 aaKnown RBP4.45□□□□□ -1.7
NF1-219ENST00000579081 GPX1P07203 203 aa4.45□□□□□ -1.7
NF1-219ENST00000579081 RPL31P62899 125 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms