RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 DEFB124Q8NES8 71 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 OR10G9Q8NGN4 311 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 OR10G7Q8NGN6 311 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 RNF138Q8WVD3 245 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 H0Y980 276 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 M0R1B8 84 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 IGKV1-5P01602 117 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 HBZP02008 142 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 RPL30P62888 115 aaKnown RBP11.54□□□□□ -0.56
NDEL1-204ENST00000578172 PSG7Q13046 419 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 LRRC29Q8WV35 223 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 MS4A10Q96PG2 267 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 RALYQ9UKM9 306 aaKnown RBP11.54□□□□□ -0.56
NDEL1-204ENST00000578172 POLDIP2Q9Y2S7 368 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 UBE2CO00762 179 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 APELAP0DMC3 54 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 ARV1Q9H2C2 271 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 OR51I2Q9H344 312 aa11.54□□□□□ -0.56
NDEL1-204ENST00000578172 ZNRF1Q8ND25 227 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 GTF3AQ92664 365 aaKnown RBP11.53□□□□□ -0.56
NDEL1-204ENST00000578172 FER1L6-AS2Q96M78 137 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 OPN3Q9H1Y3 402 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-204ENST00000578172 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
NDEL1-204ENST00000578172 SPRR3Q9UBC9 169 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 CA11O75493 328 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 NAPSAO96009 420 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 THBS3P49746 956 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 NMSQ5H8A3 153 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 PCSK4Q6UW60 755 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.53□□□□□ -0.56
NDEL1-204ENST00000578172 GALR1P47211 349 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 GPR12P47775 334 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 PAX9P55771 341 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 ID3Q02535 119 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 MSMO1Q15800 293 aa11.53□□□□□ -0.56
NDEL1-204ENST00000578172 C12orf77C9JDV5 145 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 M0R143 59 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 SLC31A2O15432 143 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 DNPH1O43598 174 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 IGKV1-39P01597 117 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 IGKV1D-39P04432 117 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 BCL2P10415 239 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 UCP3P55916 312 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 SLC35B1P78383 322 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 CATR1Q13166 79 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 KLF14Q8TD94 323 aaPredicted RBP11.52□□□□□ -0.56
NDEL1-204ENST00000578172 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.56
NDEL1-204ENST00000578172 A0A1W2PNU3 283 aaPredicted RBP11.52□□□□□ -0.57
NDEL1-204ENST00000578172 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
NDEL1-204ENST00000578172 COL10A1Q03692 680 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 WDR86Q86TI4 376 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 OR5D13Q8NGL4 314 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 PCGF1Q9BSM1 259 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 TCF21O43680 179 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 ZNF324BQ6AW86 544 aaPredicted RBP11.52□□□□□ -0.57
NDEL1-204ENST00000578172 ZCCHC24Q8N2G6 241 aaKnown RBP11.52□□□□□ -0.57
NDEL1-204ENST00000578172 ABHD12Q8N2K0 398 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 OR10A7Q8NGE5 316 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 MISP3Q96FF7 219 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 TMEM56Q96MV1 263 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 VPS25Q9BRG1 176 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 ZDHHC11Q9H8X9 412 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 TMEM56-RWDD3S4R434 201 aa11.52□□□□□ -0.57
NDEL1-204ENST00000578172 C1QTNF9BB2RNN3 333 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
NDEL1-204ENST00000578172 UCP2P55851 309 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 FOXF2Q12947 444 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 RPL39P5Q59GN2 51 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 FAM122AQ96E09 287 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 IGF2RP11717 2491 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 ODAMA1E959 279 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 ELOBQ15370 118 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 FDCSPQ8NFU4 85 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 PINX1Q96BK5 328 aaKnown RBP11.51□□□□□ -0.57
NDEL1-204ENST00000578172 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 MDFIC2A0A1B0GVS7 189 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 B4E171 279 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 TSPAN7P41732 249 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 RNPS1Q15287 305 aaKnown RBP11.51□□□□□ -0.57
NDEL1-204ENST00000578172 IQCJQ1A5X6 159 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 OR13A1Q8NGR1 328 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 RPH3ALQ9UNE2 315 aa11.51□□□□□ -0.57
NDEL1-204ENST00000578172 MUC6Q6W4X9 2439 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 MYOD1P15172 320 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms