RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SAA2-SAA4A0A096LPE2 208 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 A0A1W2PN81 502 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 EFCAB10A6NFE3 127 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 MAS1P04201 325 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 SAA2P0DJI9 122 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 CHRNA7P36544 502 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 NUP62P37198 522 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 PRR18Q8N4B5 295 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 PTX4Q96A99 478 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 TMEM80Q96HE8 168 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 PGLYRP3Q96LB9 341 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 TM2D1Q9BX74 207 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 AIREO43918 545 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 JTBO76095 146 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 TFAP2AP05549 437 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 SLURP1P55000 103 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 RPS11P62280 158 aaKnown RBP eCLIP8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 CX3CL1P78423 397 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 ADARB1P78563 741 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 Q8N1Y9 231 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 Q8N402 240 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 JAGN1Q8N5M9 183 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 SETD9Q8NE22 299 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 OR52L2PQ8NGH6 319 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 NEDD4LQ96PU5 975 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 SLC25A17O43808 307 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 IGHV4-30-4P0DP06 118 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 SLC2A2P11168 524 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 RCC1P18754 421 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 TATDN3Q17R31 274 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 ECSCRQ19T08 205 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 ACTBL2Q562R1 376 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 ZNF485Q8NCK3 441 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 PYDC1Q8WXC3 89 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 DERL3Q96Q80 235 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 COL7A1Q02388 2944 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 A0A1W2PP11 408 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 H0YJW9 148 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 WBP4O75554 376 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 DIRAS3O95661 229 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 CD37P11049 281 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 EGR2P11161 476 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 PLGLAQ15195 96 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 LCN12Q6JVE5 192 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 ARPC1AQ92747 370 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 USMG5Q96IX5 58 aa8.63□□□□□ -1.03
SMARCE1-214ENST00000578112 C13orf42A0A1B0GVH6 325 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 HMX3A6NHT5 357 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 SOX15O60248 233 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 SCAF4O95104 1147 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 NAPSAO96009 420 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 PPP1CCP36873 323 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 SPCS3P61009 180 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 RAB4BP61018 213 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 NDPQ00604 133 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 GNMTQ14749 295 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 GLT8D1Q68CQ7 371 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 SLC25A24Q6NUK1 477 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 UBALD1Q8TB05 177 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 SMPD3Q9NY59 655 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 RBMX2Q9Y388 322 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 DHFRP00374 187 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 CT45A6P0DMU7 189 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 CT45A5P0DMU8 189 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 CT45A7P0DMV0 189 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 CNTFRP26992 372 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 TPPP2P59282 170 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 RPS27AP62979 156 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 C1orf100Q5SVJ3 147 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 XAF1Q6GPH4 301 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 OVCH2Q7RTZ1 564 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 SVOPQ8N4V2 548 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 POC5Q8NA72 575 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 KCNG3Q8TAE7 436 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 FAM46BQ96A09 425 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 FBXL15Q9H469 300 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 AMBNQ9NP70 447 aa8.62□□□□□ -1.03
SMARCE1-214ENST00000578112 LOC100506127A0A0U1RQW1 187 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 F8W036 122 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 APOA2P02652 100 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 LGALS7P47929 136 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 SERPINB10P48595 397 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 KLF5Q13887 457 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 PSG5Q15238 335 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 SSX1Q16384 188 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 TM4SF20Q53R12 229 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 OR2G6Q5TZ20 316 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 RNLSQ5VYX0 342 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 FAM53AQ6NSI3 398 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 PACRGLQ8N7B6 248 aa8.61□□□□□ -1.03
SMARCE1-214ENST00000578112 RITA1Q96K30 269 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms