RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 KIAA1456Q9P272 454 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 J3QRK9 145 aa15.21■□□□□ 0.03
SS18-208ENST00000577751 SLC22A5O76082 557 aa15.21■□□□□ 0.03
SS18-208ENST00000577751 THBS3P49746 956 aa15.21■□□□□ 0.03
SS18-208ENST00000577751 GPX8Q8TED1 209 aa15.21■□□□□ 0.03
SS18-208ENST00000577751 FLYWCH2Q96CP2 140 aaKnown RBP15.21■□□□□ 0.03
SS18-208ENST00000577751 ADTRPQ96IZ2 230 aa15.21■□□□□ 0.03
SS18-208ENST00000577751 SLC35D1Q9NTN3 355 aa15.21■□□□□ 0.03
SS18-208ENST00000577751 MRPS7Q9Y2R9 242 aaKnown RBP15.21■□□□□ 0.03
SS18-208ENST00000577751 MGAM2Q2M2H8 2515 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 IGHV7-81A0A0B4J1V7 117 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 OPN1MWP04001 364 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 FCER2P06734 321 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 OPN1MW2P0DN77 364 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 OPN1MW3P0DN78 364 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 OR5H8P0DN80 308 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 NSUN5P1Q3KNT7 163 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 COMMD1Q8N668 190 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 DYNC2LI1Q8TCX1 351 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 GON7Q9BXV9 100 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 FBXL15Q9H469 300 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 IFT46Q9NQC8 304 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 SCOCQ9UIL1 159 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 ADAM30Q9UKF2 790 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 TSSC4Q9Y5U2 329 aaPredicted RBP15.2■□□□□ 0.02
SS18-208ENST00000577751 VWFP04275 2813 aa15.2■□□□□ 0.02
SS18-208ENST00000577751 TCRBV4S1A1TA0A5B7 111 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 LINC00473A8K010 186 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 SPDEFO95238 335 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 FCGR2CP31995 323 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 RPS16P62249 146 aaKnown RBP15.19■□□□□ 0.02
SS18-208ENST00000577751 SLC35B1P78383 322 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 CFHR3Q02985 330 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 EIF4EBP1Q13541 118 aaPredicted RBP15.19■□□□□ 0.02
SS18-208ENST00000577751 CDK10Q15131 360 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 PSG5Q15238 335 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 TMEM177Q53S58 311 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 OVCH2Q7RTZ1 564 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 BVESQ8NE79 360 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 GIMAP1Q8WWP7 306 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 TSNAXQ99598 290 aaKnown RBP15.19■□□□□ 0.02
SS18-208ENST00000577751 OR51J1Q9H342 316 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 SCPEP1Q9HB40 452 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 RBMX2Q9Y388 322 aaKnown RBP15.19■□□□□ 0.02
SS18-208ENST00000577751 NBEAL1Q6ZS30 2694 aa15.19■□□□□ 0.02
SS18-208ENST00000577751 H3BMQ9 156 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 PPYP01298 95 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 RRASP10301 218 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 AADACP22760 399 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 LGALS7P47929 136 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 MSMO1Q15800 293 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 DHRS11Q6UWP2 260 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 SNX29P2Q8IUI4 249 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 LYSMD2Q8IV50 215 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 FAM110DQ8TAY7 271 aaPredicted RBP15.18■□□□□ 0.02
SS18-208ENST00000577751 ISOC1Q96CN7 298 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 MIXL1Q9H2W2 232 aa15.18■□□□□ 0.02
SS18-208ENST00000577751 METTL1Q9UBP6 276 aaKnown RBP15.18■□□□□ 0.02
SS18-208ENST00000577751 PLXNB1O43157 2135 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 FAM25AB3EWG3 89 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 FAM25CB3EWG5 89 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 FAM25GB3EWG6 89 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 SULT1C2O00338 296 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 FCN1O00602 326 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 TPPPO94811 219 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 IGLV2-23P01705 113 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 CX3CL1P78423 397 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 DYRK1AQ13627 763 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 RTL8BQ17RB0 113 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 ZNF660Q6AZW8 331 aaPredicted RBP15.17■□□□□ 0.02
SS18-208ENST00000577751 TEX38Q6PEX7 206 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 CCDC59Q9P031 241 aaKnown RBP15.17■□□□□ 0.02
SS18-208ENST00000577751 EXTL2Q9UBQ6 330 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 CEPT1Q9Y6K0 416 aa15.17■□□□□ 0.02
SS18-208ENST00000577751 SRRM4A7MD48 611 aaKnown RBP15.16■□□□□ 0.02
SS18-208ENST00000577751 CTDSP2O14595 271 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 ATP6V0E1O15342 81 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 IGHG4P01861 327 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 CRYGBP07316 175 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 PPIFP30405 207 aaKnown RBP15.16■□□□□ 0.02
SS18-208ENST00000577751 CRIP2P52943 208 aaPredicted RBP15.16■□□□□ 0.02
SS18-208ENST00000577751 TAS2R46P59540 309 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 RPL30P62888 115 aaKnown RBP15.16■□□□□ 0.02
SS18-208ENST00000577751 RNF152Q8N8N0 203 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 OR4F17Q8NGA8 305 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 R3HDM4Q96D70 268 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 OR4F4Q96R69 305 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 HSD17B10Q99714 261 aaKnown RBP15.16■□□□□ 0.02
SS18-208ENST00000577751 ZFP57Q9NU63 452 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 EHFQ9NZC4 300 aa15.16■□□□□ 0.02
SS18-208ENST00000577751 A0A1W2PRX2 142 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 SLC25A17O43808 307 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 NOL3O60936 208 aaKnown RBP15.15■□□□□ 0.02
SS18-208ENST00000577751 PMP2P02689 132 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 EGR2P11161 476 aaPredicted RBP15.15■□□□□ 0.02
SS18-208ENST00000577751 VDAC1P21796 283 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 RFX2P48378 723 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 NDPQ00604 133 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 CBX3Q13185 183 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 PLGLAQ15195 96 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms