RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MARCH1Q8TCQ1 289 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 DDB2Q92466 427 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 C5orf30Q96GV9 206 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 ABHD14BQ96IU4 210 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 HSD17B10Q99714 261 aaKnown RBP8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 MARVELD1Q9BSK0 173 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 OR2D2Q9H210 308 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 C5orf66Q9H5L9 145 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 ZNRD1Q9P1U0 126 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 RNF150Q9ULK6 438 aa8.98□□□□□ -0.97
CDK5RAP3-204ENST00000577664 TRAV40A0A0B4J280 105 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 LINC00854A0A1B0GVQ3 168 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 A0A1W2PPE3 182 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 CT45A6P0DMU7 189 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 CT45A5P0DMU8 189 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 CT45A7P0DMV0 189 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 DUTP33316 252 aaKnown RBP8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 EBI3Q14213 229 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 CCDC144NLQ6NUI1 221 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 LHFPL4Q7Z7J7 247 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 SLC25A42Q86VD7 318 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 THNSL2Q86YJ6 484 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 CADM3Q8N126 398 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 SECTM1Q8WVN6 248 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 GALNT14Q96FL9 552 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 NABP2Q9BQ15 211 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 SLC2A9Q9NRM0 540 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 VSIG4Q9Y279 399 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 RBM7Q9Y580 266 aaKnown RBP8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 NUBP2Q9Y5Y2 271 aa8.97□□□□□ -0.97
CDK5RAP3-204ENST00000577664 IGHV1-3A0A0C4DH29 117 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 A0A1W2PPI3 338 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 HSD17B6O14756 317 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MPPED1O15442 326 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CD1BP29016 333 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MC5RP33032 325 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 THBS3P49746 956 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 BRWD1-AS2P59051 145 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FXYD4P59646 89 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PRB3Q04118 309 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DIAPH2-AS1Q14236 149 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OXA1LQ15070 435 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RGS21Q2M5E4 152 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FBLN7Q53RD9 439 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RPL39P5Q59GN2 51 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM128Q5BJH2 165 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MINDY2Q8NBR6 621 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CFHR4Q92496 578 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TOMM40LQ969M1 308 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RNF5Q99942 180 aa8.96□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CRYM-AS1A6NIL9 109 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LINC00473A8K010 186 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.983e-11■□□□□ 9.1
CDK5RAP3-204ENST00000577664 RRASP10301 218 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 F2RP25116 425 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 S100GP29377 79 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PIGPP57054 158 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TGIF2LXQ8IUE1 241 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DYNAPQ8N1N2 210 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CCDC71LQ8N9Z2 235 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ZNF383Q8NA42 475 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PIFOQ8TCI5 191 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CD300LFQ8TDQ1 290 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CHPT1Q8WUD6 406 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 C17orf50Q8WW18 174 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM230Q96A57 120 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RPEQ96AT9 228 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 C20orf85Q9H1P6 137 aa8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 C14orf166Q9Y224 244 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-204ENST00000577664 A0A0U1RQK1 487 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 H0YJW9 148 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 M0R1X1 148 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 VENTXO95231 258 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 IL5P05113 134 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FBP1P09467 338 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PGAM2P15259 253 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 KIR2DS2P43631 304 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TAS2R31P59538 309 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RPL30P62888 115 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SUPT4H1P63272 117 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 BAMBIQ13145 260 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SCGB2A2Q13296 93 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SSX2Q16385 188 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RUSC1-AS1Q66K80 236 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DHRS7BQ6IAN0 325 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PLET1Q6UQ28 207 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 BRD3OSQ6XYD6 125 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 Q6YL49 198 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PDZD9Q8IXQ8 264 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CENPSQ8N2Z9 138 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ADAD2Q8NCV1 583 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ENKURQ8TC29 256 aa8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MS4A7Q9GZW8 240 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TEX13DA0A0J9YY54 714 aaPredicted RBP8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 H0Y980 276 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PEX14O75381 377 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 H2AFB2P0C5Z0 115 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms