RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SMDT1Q9H4I9 107 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 XPNPEP1Q9NQW7 623 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 SLC2A9Q9NRM0 540 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 GLS2Q9UI32 602 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 HHLA2Q9UM44 414 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 POLR3HQ9Y535 204 aaPredicted RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 PCYT1BQ9Y5K3 369 aaPredicted RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 PXDNLA1KZ92 1463 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 OTOFQ9HC10 1997 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 IGHV3-15A0A0B4J1V0 119 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 IGHV3-73A0A0B4J1V6 119 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 A0A1B0GVG6 124 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 C21orf140B9A014 251 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 FNDC10F2Z333 226 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 CXCR6O00574 342 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 LIN7AO14910 233 aaPredicted RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 CRTAPO75718 401 aaPredicted RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 CD7P09564 240 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 LINC00614P0C842 121 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 ZNF728P0DKX0 622 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 HIST1H1CP16403 213 aaKnown RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 ALOX5APP20292 161 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 NPPCP23582 126 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 PEBP1P30086 187 aaKnown RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 CDC34P49427 236 aaPredicted RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 RWDD2BP57060 319 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 RPS24P62847 133 aaKnown RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 HLA-DRB3P79483 266 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 COTL1Q14019 142 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 ACSBG2Q5FVE4 666 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 SDHAF4Q5VUM1 108 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 PLEKHG7Q6ZR37 379 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 COMMD7Q86VX2 200 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 LRRC34Q8IZ02 419 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 NATD1Q8N6N6 113 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 CNEP1R1Q8N9A8 125 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 OR51H1Q8NH63 302 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 SGMS2Q8NHU3 365 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 FNDC9Q8TBE3 224 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 CYGBQ8WWM9 190 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 KLK6Q92876 244 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 PPWD1Q96BP3 646 aaKnown RBP0.65□□□□□ -2.31
TOP2A-202ENST00000577541 OR7D2Q96RA2 312 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 UBQLN4Q9NRR5 601 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 PRO2289Q9P1D8 64 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 ANAPC10Q9UM13 185 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 SNX12Q9UMY4 172 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 SLX4Q8IY92 1834 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 HECW2Q9P2P5 1572 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 STRCP1A6NGW2 1772 aa0.65□□□□□ -2.31
TOP2A-202ENST00000577541 HECW1Q76N89 1606 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 KNCNA6PVL3 124 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 M0QZ92 97 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 COX7A2LO14548 114 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 COPEO14579 308 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 GNRH2O43555 120 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 STK16O75716 305 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 PSMG1O95456 288 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 OCMP0CE72 109 aaPredicted RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 NQO1P15559 274 aaKnown RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 CFL1P23528 166 aaKnown RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 RPS12P25398 132 aaKnown RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 CD200P41217 278 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 LPAR6P43657 344 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 MAP2K4P45985 399 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 XCL1P47992 114 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 ZNF140P52738 457 aaPredicted RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 TMEM33P57088 247 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 MYL6P60660 151 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 TNFAIP6P98066 277 aaPredicted RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 FABP5Q01469 135 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 MGAT3Q09327 533 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 RSU1Q15404 277 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 SPIN4Q56A73 249 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 SFXN4Q6P4A7 337 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 ALKAL1Q6UXT8 129 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 SLC35F6Q8N357 371 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 OR51T1Q8NGJ9 327 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 CLDND2Q8NHS1 167 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 GPR119Q8TDV5 335 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 TMBIM1Q969X1 311 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 MGLLQ99685 303 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 TXNDC17Q9BRA2 123 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 TIMM21Q9BVV7 248 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 BCL2L14Q9BZR8 327 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 MAP1LC3AQ9H492 121 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 LRRC19Q9H756 370 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 CXorf21Q9HAI6 301 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 HRASLSQ9HDD0 168 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 EMC3Q9P0I2 261 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 PSMD13Q9UNM6 376 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 NOSIPQ9Y314 301 aaKnown RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 V9GYY5 206 aaPredicted RBP0.64□□□□□ -2.31
TOP2A-202ENST00000577541 CUL9Q8IWT3 2517 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 RGS12O14924 1447 aa0.64□□□□□ -2.31
TOP2A-202ENST00000577541 SCN9AQ15858 1988 aa0.63□□□□□ -2.31
TOP2A-202ENST00000577541 PLXNA3P51805 1871 aa0.63□□□□□ -2.31
TOP2A-202ENST00000577541 GBF1Q92538 1859 aa0.63□□□□□ -2.31
TOP2A-202ENST00000577541 A0A087WUU8 490 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms