RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 OR5H8P0DN80 308 aa20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 CD33P20138 364 aa20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 NFYAP23511 347 aaPredicted RBP20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 OXLD1Q5BKU9 147 aa20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 RNF152Q8N8N0 203 aa20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 KLHL30-AS1Q8NEE0 82 aa20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 FLYWCH2Q96CP2 140 aaKnown RBP20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 TSNAXQ99598 290 aaKnown RBP20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 METTL1Q9UBP6 276 aaKnown RBP20.68■□□□□ 0.9
PPP4R1-204ENST00000577393 PTHLHP12272 177 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 CX3CL1P78423 397 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 NDPQ00604 133 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 BEAN1Q3B7T3 259 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 UBE2NLQ5JXB2 153 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 ZNF660Q6AZW8 331 aaPredicted RBP20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 C8orf86Q6ZUL3 223 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 GVQW1Q8N7I0 195 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 S100A16Q96FQ6 103 aaKnown RBP20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 OR2W1Q9Y3N9 320 aa20.67■□□□□ 0.9
PPP4R1-204ENST00000577393 XRCC3O43542 346 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 PPIFP30405 207 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 THBS3P49746 956 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 ETV3LQ6ZN32 361 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 HOGA1Q86XE5 327 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 ZNF695Q8IW36 515 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 SAMD12Q8N8I0 201 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 BEST4Q8NFU0 473 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 CLCC1Q96S66 551 aa20.66■□□□□ 0.9
PPP4R1-204ENST00000577393 TRAV41A0A0B4J266 112 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 SPDEFO95238 335 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 HLA-DQB1P01920 261 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 PSMB8P28062 276 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 SLC6A1P30531 599 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 LUMP51884 338 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 BVESQ8NE79 360 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 KCTD12Q96CX2 325 aaKnown RBP20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 FBXO7Q9Y3I1 522 aa20.65■□□□□ 0.9
PPP4R1-204ENST00000577393 DUTP33316 252 aaKnown RBP20.64■□□□□ 0.89
PPP4R1-204ENST00000577393 TAGLNQ01995 201 aaKnown RBP20.64■□□□□ 0.89
PPP4R1-204ENST00000577393 PDLIM3Q53GG5 364 aaPredicted RBP20.64■□□□□ 0.89
PPP4R1-204ENST00000577393 KPRPQ5T749 579 aaPredicted RBP20.64■□□□□ 0.89
PPP4R1-204ENST00000577393 ADTRPQ96IZ2 230 aa20.64■□□□□ 0.89
PPP4R1-204ENST00000577393 NAA50Q9GZZ1 169 aaKnown RBP20.64■□□□□ 0.89
PPP4R1-204ENST00000577393 IGKV1D-13A0A0B4J2D9 117 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 SLC25A17O43808 307 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 FCER2P06734 321 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 IGKV1-13P0DP09 117 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 IGLL1P15814 213 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 CDX1P47902 265 aaPredicted RBP20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 ARPC4P59998 168 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 ANKRD13BQ86YJ7 626 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 ZNF645Q8N7E2 425 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 LINC00482Q8N8I6 264 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 DDB2Q92466 427 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 MRPS26Q9BYN8 205 aaKnown RBP20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 TPSG1Q9NRR2 321 aa20.63■□□□□ 0.89
PPP4R1-204ENST00000577393 LINC00473A8K010 186 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 TUSC2O75896 110 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 IGLV2-23P01705 113 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 RRASP10301 218 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 EGR2P11161 476 aaPredicted RBP20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 MYCNOSP40205 109 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 CBX5P45973 191 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 LGALS7P47929 136 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 CRIP2P52943 208 aaPredicted RBP20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 CBX3Q13185 183 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 RTL8BQ17RB0 113 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 ECSCRQ19T08 205 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 ZNF562Q6V9R5 426 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 MRPL41Q8IXM3 137 aaKnown RBP20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 MINDY2Q8NBR6 621 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 ABHD5Q8WTS1 349 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 HARBI1Q96MB7 349 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 KLK15Q9H2R5 256 aa20.62■□□□□ 0.89
PPP4R1-204ENST00000577393 MEIS3P1A6NDR6 274 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 CA2P00918 260 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 IGLV1-40P01703 118 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 TAS2R20P59543 309 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 CTF1Q16619 201 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 TMEM177Q53S58 311 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 C19orf54Q5BKX5 351 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 TMEM69Q5SWH9 247 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 DUX3Q96PT4 197 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 COMMD3Q9UBI1 195 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 NUBP2Q9Y5Y2 271 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 A3GALT2U3KPV4 340 aa20.61■□□□□ 0.89
PPP4R1-204ENST00000577393 SHOXO15266 292 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 SLC22A5O76082 557 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 GABARAPO95166 117 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 IGLV2-14P01704 120 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 GPR107Q5VW38 600 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 TMEM65Q6PI78 240 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 MYOZ3Q8TDC0 251 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 SNAPC3Q92966 411 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 RAX2Q96IS3 184 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 P2RX4Q99571 388 aa20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 FAM103A1Q9BTL3 118 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 RBMX2Q9Y388 322 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-204ENST00000577393 SRRM4A7MD48 611 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-204ENST00000577393 EIF4EP06730 217 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms