RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ERVK13-1Q9NX77 482 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 BABAM2Q9NXR7 383 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 SLC23A1Q9UHI7 598 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 LSM2Q9Y333 95 aaKnown RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 IGKV1-12A0A0C4DH73 117 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 SERTM2A0A1B0GWG4 89 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 LOC107986453A0A1B0GWG9 222 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 DAPL1A0PJW8 107 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 CCDC182A6NF36 153 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 PRR32B1ATL7 298 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 ZNF670-ZNF695F2Z2N8 137 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 H0Y8G0 127 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 AIREO43918 545 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 OR2A4O95047 310 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 IGKV1D-12P01611 117 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 TRGV3P03979 118 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 CD7P09564 240 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 UBCP0CG48 685 aaKnown RBP4.45□□□□□ -1.7
SMG6-219ENST00000575663 ZNF20P17024 532 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 ATF1P18846 271 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 GZMHP20718 246 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 PSMB9P28065 219 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 FGF9P31371 208 aaPredicted RBP4.45□□□□□ -1.7
SMG6-219ENST00000575663 SERPINB10P48595 397 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 TCTAP57738 103 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 NDPQ00604 133 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 KLF5Q13887 457 aaPredicted RBP4.45□□□□□ -1.7
SMG6-219ENST00000575663 MED22Q15528 200 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 RPEL1Q2QD12 228 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 CNPY1Q3B7I2 92 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 TMEM30BQ3MIR4 351 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 YIF1BQ5BJH7 314 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 C19orf54Q5BKX5 351 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 RSBN1Q5VWQ0 802 aaPredicted RBP4.45□□□□□ -1.7
SMG6-219ENST00000575663 ZNF660Q6AZW8 331 aaPredicted RBP4.45□□□□□ -1.7
SMG6-219ENST00000575663 Q6P435 159 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 RPL22L1Q6P5R6 122 aaKnown RBP4.45□□□□□ -1.7
SMG6-219ENST00000575663 CD200R1LQ6Q8B3 271 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 SAXO1Q8IYX7 474 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 OR5D18Q8NGL1 313 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 DYNLRB2Q8TF09 96 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 RFT1Q96AA3 541 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 YIPF6Q96EC8 236 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 RHOVQ96L33 236 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 MS4A10Q96PG2 267 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 FUNDC2Q9BWH2 189 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 WFDC10AQ9H1F0 79 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 ADGRL4Q9HBW9 690 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 NDUFB11Q9NX14 153 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 GFOD1Q9NXC2 390 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 TP53TG1Q9Y2A0 90 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 FBXO7Q9Y3I1 522 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 HERC1Q15751 4861 aa4.45□□□□□ -1.7
SMG6-219ENST00000575663 DSCAML1Q8TD84 2053 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 LOC102724200A0A096LPH7 203 aaPredicted RBP4.44□□□□□ -1.7
SMG6-219ENST00000575663 IGHV3-43A0A0B4J1X8 118 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 IGKV1-9A0A0C4DH69 117 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 TRDV1A0A1B0GX56 115 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 TMEM30CPA0ZSE6 113 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 IZUMO1RA6ND01 250 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 C5orf51A6NDU8 294 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 ZNF98A6NK75 572 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 H3BUA1 57 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 OGG1O15527 345 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 LANCL1O43813 399 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 RPP14O95059 124 aaKnown RBP4.44□□□□□ -1.7
SMG6-219ENST00000575663 NDUFA3O95167 84 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 CSN3P07498 182 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 IGHV3-43DP0DP04 118 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 CD36P16671 472 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 BCAP31P51572 246 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 CCR9P51686 369 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 AP2S1P53680 142 aaPredicted RBP4.44□□□□□ -1.7
SMG6-219ENST00000575663 SPCS3P61009 180 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 IL13RA2Q14627 380 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 CDK5R1Q15078 307 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 CTF1Q16619 201 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 GUCA2BQ16661 112 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 AKIRIN2Q53H80 203 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 GPR107Q5VW38 600 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 UNQ5815/PRO19632Q6UWF5 114 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 IL34Q6ZMJ4 242 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 WFDC3Q8IUB2 231 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 SLC35F2Q8IXU6 374 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 NPBQ8NG41 125 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 RNASE11Q8TAA1 199 aaKnown RBP4.44□□□□□ -1.7
SMG6-219ENST00000575663 GRPEL2Q8TAA5 225 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 PLPPR1Q8TBJ4 325 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 UFD1Q92890 307 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 ARL11Q969Q4 196 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 RNF183Q96D59 192 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 CPNE2Q96FN4 548 aaPredicted RBP4.44□□□□□ -1.7
SMG6-219ENST00000575663 ALG8Q9BVK2 526 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 PLGRKTQ9HBL7 147 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 ZNF355PQ9NSJ1 428 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 GNG12Q9UBI6 72 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 SSR3Q9UNL2 185 aa4.44□□□□□ -1.7
SMG6-219ENST00000575663 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms