RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 ZNF383Q8NA42 475 aa14.57□□□□□ -0.08
CCDC40-213ENST00000574933 ZFAND2BQ8WV99 257 aa14.57□□□□□ -0.08
CCDC40-213ENST00000574933 DDB2Q92466 427 aa14.57□□□□□ -0.08
CCDC40-213ENST00000574933 MRGPRFQ96AM1 343 aa14.57□□□□□ -0.08
CCDC40-213ENST00000574933 HSD17B10Q99714 261 aaKnown RBP14.57□□□□□ -0.08
CCDC40-213ENST00000574933 C7orf50Q9BRJ6 194 aaKnown RBP14.57□□□□□ -0.08
CCDC40-213ENST00000574933 RSRP1Q9BUV0 290 aa14.57□□□□□ -0.08
CCDC40-213ENST00000574933 CHIAQ9BZP6 476 aa14.57□□□□□ -0.08
CCDC40-213ENST00000574933 SURF2Q15527 256 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-213ENST00000574933 ZNF57Q68EA5 555 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-213ENST00000574933 C16orf82Q7Z2V1 217 aa14.56□□□□□ -0.08
CCDC40-213ENST00000574933 SLC38A6Q8IZM9 456 aa14.56□□□□□ -0.08
CCDC40-213ENST00000574933 OR51S1Q8NGJ8 323 aa14.56□□□□□ -0.08
CCDC40-213ENST00000574933 ZNF486Q96H40 463 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-213ENST00000574933 SCP2D1Q9UJQ7 156 aa14.56□□□□□ -0.08
CCDC40-213ENST00000574933 IGHV3-72A0A0B4J1Y9 119 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 NAP1L6A6NFF2 107 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 LINC00473A8K010 186 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 TRIM77I1YAP6 450 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 GPR31O00270 319 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 IGKV1D-33P01593 117 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 IGKV1-33P01594 117 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 INPP1P49441 399 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 FBLN7Q53RD9 439 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 C16orf87Q6PH81 154 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 GLDNQ6ZMI3 551 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-213ENST00000574933 DRAXINQ8NBI3 349 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-213ENST00000574933 OR13C8Q8NGS7 320 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 OR2T10Q8NGZ9 312 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 CAPSLQ8WWF8 208 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 EAF1Q96JC9 268 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-213ENST00000574933 WASHC3Q9Y3C0 194 aa14.55□□□□□ -0.08
CCDC40-213ENST00000574933 OR2F2O95006 317 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 MOSP00540 346 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 RRASP10301 218 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 CD24P25063 80 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 LINC00205P59089 165 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 RND3P61587 244 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 LY6EQ16553 131 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 SCGB2B2Q4G0G5 96 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 IDO2Q6ZQW0 420 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 PDPNQ86YL7 162 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 RBM14Q96PK6 669 aaKnown RBP14.54□□□□□ -0.08
CCDC40-213ENST00000574933 DUX5Q96PT3 197 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 RNF5Q99942 180 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 RAB18Q9NP72 206 aa14.54□□□□□ -0.08
CCDC40-213ENST00000574933 PLA2G10O15496 165 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 GPR137BO60478 399 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 UPK1BO75841 260 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 APOA2P02652 100 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 RPL30P62888 115 aaKnown RBP14.53□□□□□ -0.08
CCDC40-213ENST00000574933 CMTM1Q8IZ96 169 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 OR8H1Q8NGG4 311 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 ZFAND1Q8TCF1 268 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 SLC35D1Q9NTN3 355 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 MCUBQ9NWR8 336 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 GPR132Q9UNW8 380 aa14.53□□□□□ -0.08
CCDC40-213ENST00000574933 CHST1O43916 411 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 PGLYRP1O75594 196 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-213ENST00000574933 CTSDP07339 412 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-213ENST00000574933 TMEM11P17152 192 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 RIPPLY3P57055 190 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 CATR1Q13166 79 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 KCTD9Q7L273 389 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 MARCH1Q8TCQ1 289 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 SLC25A33Q9BSK2 321 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 PLSCR3Q9NRY6 295 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 PRELID3BQ9Y3B1 194 aa14.52□□□□□ -0.09
CCDC40-213ENST00000574933 CENPXA8MT69 81 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 RBFOX2O43251 390 aaKnown RBP eCLIP14.51□□□□□ -0.09
CCDC40-213ENST00000574933 PGAM2P15259 253 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 BTCP35070 178 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 KIR2DS2P43631 304 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 BRWD1-AS2P59051 145 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 HES1Q14469 280 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 TMEM177Q53S58 311 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 DHRS7BQ6IAN0 325 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-213ENST00000574933 TMEM219Q86XT9 240 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 TCTEX1D1Q8N7M0 179 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 OR4C13Q8NGP0 309 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 SCGB3A2Q96PL1 93 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 SLC25A21Q9BQT8 299 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-213ENST00000574933 SLC2A9Q9NRM0 540 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 TNFRSF19Q9NS68 423 aa14.51□□□□□ -0.09
CCDC40-213ENST00000574933 FAM212BQ9NTI7 297 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-213ENST00000574933 FAM181BA6NEQ2 426 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 RNF212BA8MTL3 300 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 M0QZK8 103 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 FGF16O43320 207 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 LYRM1O43325 122 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 IGKV1-16P04430 117 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 S100GP29377 79 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 IFITM3Q01628 133 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 RTL8BQ17RB0 113 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 NPBQ8NG41 125 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 TCTEX1D2Q8WW35 142 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 GPHA2Q96T91 129 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 RTBDNQ9BSG5 229 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-213ENST00000574933 C5orf66Q9H5L9 145 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 C1RLQ9NZP8 487 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms