RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 MRGPRG-AS1Q2M3A8 158 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 ZNF773Q6PK81 442 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 ZNF562Q6V9R5 426 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 PDPNQ86YL7 162 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 OR5M8Q8NGP6 311 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 FCGR1BQ92637 280 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 ZNF221Q9UK13 617 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 STUB1Q9UNE7 303 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 FOXA2Q9Y261 457 aaPredicted RBP13.5□□□□□ -0.25
SMG6-214ENST00000573827 A0A075B6Q4 140 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 M0R1X1 148 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 ARPC1BO15143 372 aaKnown RBP13.49□□□□□ -0.25
SMG6-214ENST00000573827 BET1O15155 118 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 OR8U9P0C7N5 309 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 GADD45AP24522 165 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 RAB25P57735 213 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 H1FOOQ8IZA3 346 aaPredicted RBP13.49□□□□□ -0.25
SMG6-214ENST00000573827 TCTEX1D1Q8N7M0 179 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 OR1N2Q8NGR9 330 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 CASTOR1Q8WTX7 329 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 DPF1Q92782 380 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 FAM103A1Q9BTL3 118 aaKnown RBP13.49□□□□□ -0.25
SMG6-214ENST00000573827 ALX4Q9H161 411 aaPredicted RBP13.49□□□□□ -0.25
SMG6-214ENST00000573827 OR2D2Q9H210 308 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 OR51E2Q9H255 320 aa13.49□□□□□ -0.25
SMG6-214ENST00000573827 METTL1Q9UBP6 276 aaKnown RBP13.49□□□□□ -0.25
SMG6-214ENST00000573827 METTL21EPA6NDL7 271 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 SRRM4A7MD48 611 aaKnown RBP13.48□□□□□ -0.25
SMG6-214ENST00000573827 CA2P00918 260 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 DTYMKP23919 212 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 DGCR2P98153 550 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 TMEM65Q6PI78 240 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 PPP1R27Q86WC6 154 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 OR10J5Q8NHC4 309 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 DDB2Q92466 427 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 OR5B12Q96R08 314 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 TSNAXQ99598 290 aaKnown RBP13.48□□□□□ -0.25
SMG6-214ENST00000573827 RNF167Q9H6Y7 350 aa13.48□□□□□ -0.25
SMG6-214ENST00000573827 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
SMG6-214ENST00000573827 A0A1W2PN81 502 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 SLC25A17O43808 307 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 CLEC2LP0C7M8 214 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 CHRNA7P36544 502 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 RPS16P62249 146 aaKnown RBP13.47□□□□□ -0.25
SMG6-214ENST00000573827 ZNF616Q08AN1 781 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 PJVKQ0ZLH3 352 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 CDNFQ49AH0 187 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 C9orf66Q5T8R8 295 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 HACD4Q5VWC8 232 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 SFXN4Q6P4A7 337 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 TPRA1Q86W33 373 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 LFNGQ8NES3 379 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 CLCC1Q96S66 551 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 ATG5Q9H1Y0 275 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 Q9H521 79 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 SLC35D1Q9NTN3 355 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 A3GALT2U3KPV4 340 aa13.47□□□□□ -0.25
SMG6-214ENST00000573827 SEC14L6B5MCN3 397 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 SSX5O60225 188 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 APOA2P02652 100 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 OR8U8P0C7N1 319 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 MRPS15P82914 257 aaKnown RBP13.46□□□□□ -0.25
SMG6-214ENST00000573827 PLGLAQ15195 96 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 TMEM177Q53S58 311 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 C11orf87Q6NUJ2 197 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 LGALS14Q8TCE9 139 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 FLYWCH2Q96CP2 140 aaKnown RBP13.46□□□□□ -0.25
SMG6-214ENST00000573827 B9D2Q9BPU9 175 aa13.46□□□□□ -0.25
SMG6-214ENST00000573827 LINC00473A8K010 186 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 RAMP3O60896 148 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 IGLV2-14P01704 120 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
SMG6-214ENST00000573827 DUTP33316 252 aaKnown RBP13.45□□□□□ -0.26
SMG6-214ENST00000573827 SDC2P34741 201 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 LGALS7P47929 136 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 ZNF260Q3ZCT1 412 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 ACTBL2Q562R1 376 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 DEFB121Q5J5C9 76 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 NUDCD2Q8WVJ2 157 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 ARPC1AQ92747 370 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 RHOVQ96L33 236 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 DAPK2Q9UIK4 370 aa13.45□□□□□ -0.26
SMG6-214ENST00000573827 RRP15Q9Y3B9 282 aaKnown RBP13.45□□□□□ -0.26
SMG6-214ENST00000573827 DYNC2H1Q8NCM8 4307 aaKnown RBP13.45□□□□□ -0.26
SMG6-214ENST00000573827 IGHV4OR15-8A0A075B7B6 117 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 A0A087WW49 117 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 TMEM235A6NFC5 223 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 TMEM267Q0VDI3 215 aaPredicted RBP13.44□□□□□ -0.26
SMG6-214ENST00000573827 FXYD3Q14802 87 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 ARL6IP1Q15041 203 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 KCTD21Q4G0X4 260 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 PYHIN1Q6K0P9 492 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 UNQ5815/PRO19632Q6UWF5 114 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 BVESQ8NE79 360 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 OR5H6Q8NGV6 325 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 DLX4Q92988 240 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms