RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ARL3P36405 182 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 EFNB1P98172 346 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 C1orf134Q5TEV5 83 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 ZDHHC13Q8IUH4 622 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 DRAXINQ8NBI3 349 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-208ENST00000572270 NECAP1Q8NC96 275 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 OR13C5Q8NGS8 318 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 CD300LFQ8TDQ1 290 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 NSL1Q96IY1 281 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 GMPPBQ9Y5P6 360 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 UBR4Q5T4S7 5183 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 UBE2QL1A1L167 161 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 J3QLW9 94 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 SLC16A6O15403 523 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 SC5DO75845 299 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 OR2J3O76001 311 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 IFNA10P01566 189 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 AMBPP02760 352 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF19P17023 458 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 ADMP35318 185 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF93P35789 620 aaPredicted RBP9.53□□□□□ -0.88
CCDC40-208ENST00000572270 CAPGP40121 348 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 GPR176Q14439 515 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 MRGPRG-AS1Q2M3A8 158 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 DDI2Q5TDH0 399 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 C12orf73Q69YU5 71 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF529Q6P280 563 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 Q6ZTC4 211 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 UBE2DNLQ8IWF7 75 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 DMRT1Q9Y5R6 373 aa9.53□□□□□ -0.88
CCDC40-208ENST00000572270 DAPL1A0PJW8 107 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 TMEM212A6NML5 194 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 TMED1Q13445 227 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 MED21Q13503 144 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 TNXAQ16473 311 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 Q6ZR54 194 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 MRPL30Q8TCC3 161 aaKnown RBP9.52□□□□□ -0.89
CCDC40-208ENST00000572270 HARBI1Q96MB7 349 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 NDUFAF3Q9BU61 184 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 SLC35D1Q9NTN3 355 aa9.52□□□□□ -0.89
CCDC40-208ENST00000572270 MRPL27Q9P0M9 148 aaKnown RBP9.52□□□□□ -0.89
CCDC40-208ENST00000572270 RPL36Q9Y3U8 105 aaKnown RBP9.52□□□□□ -0.89
CCDC40-208ENST00000572270 OR4C46A6NHA9 309 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 TSPAN4O14817 238 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 S1PR2O95136 353 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 IFNA21P01568 189 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 IFNA17P01571 189 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 IGLV2-23P01705 113 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 CRYGBP07316 175 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 GSTT2P0CG29 244 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 GSTT2BP0CG30 244 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 PPP3R1P63098 170 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 CBX3Q13185 183 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 HMGN3Q15651 99 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 LAMTOR1Q6IAA8 161 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 Q6ZRM9 215 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 SETD9Q8NE22 299 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 OR5AK2Q8NH90 309 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 SRSF12Q8WXF0 261 aaKnown RBP9.51□□□□□ -0.89
CCDC40-208ENST00000572270 RFKQ969G6 155 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 C4orf36Q96KX1 117 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 C5orf66Q9H5L9 145 aa9.51□□□□□ -0.89
CCDC40-208ENST00000572270 FAM90A7PA6NKC0 464 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 IGHV3-23P01764 117 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 GLAP06280 429 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 CD2P06729 351 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 RBMY1A1P0DJD3 496 aaKnown RBP9.5□□□□□ -0.89
CCDC40-208ENST00000572270 C8orf88P0DMB2 117 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 FUT3P21217 361 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 SOX2P48431 317 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 TMEM187Q14656 261 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 APRG1Q8IVJ8 170 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 ACOT12Q8WYK0 555 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 MRPL48Q96GC5 212 aaKnown RBP9.5□□□□□ -0.89
CCDC40-208ENST00000572270 PDCD1LG2Q9BQ51 273 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 RIBC2Q9H4K1 309 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 TMEM138Q9NPI0 162 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 ZNF221Q9UK13 617 aa9.5□□□□□ -0.89
CCDC40-208ENST00000572270 ITGB1BP1O14713 200 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 BAG2O95816 211 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-208ENST00000572270 MYOD1P15172 320 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 DAPP51397 102 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 LINC00205P59089 165 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 SLC25A42Q86VD7 318 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 ADGRG5Q8IZF4 528 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 UFC1Q9Y3C8 167 aa9.49□□□□□ -0.89
CCDC40-208ENST00000572270 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
CCDC40-208ENST00000572270 B2RBV5 119 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms