RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CD200R1LQ6Q8B3 271 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 TCTEX1D1Q8N7M0 179 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR4A4PQ8NGN8 299 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 TSNAXQ99598 290 aaKnown RBP9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 RNF5Q99942 180 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 GNB4Q9HAV0 340 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 RDH8Q9NYR8 311 aa9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 FOXA2Q9Y261 457 aaPredicted RBP9.63□□□□□ -0.87
CTDNEP1-205ENST00000570828 A0A075B6Q4 140 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 TRDV1A0A1B0GX56 115 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 A0A1W2PN81 502 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 SHISA3A0PJX4 238 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 M0R1X1 148 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 MRPS14O60783 128 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 RAMP3O60896 148 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 SPDEFO95238 335 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 FCGR3AP08637 254 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 GNB3P16520 340 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 RAB6AP20340 208 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 GALP22466 123 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 CHRNA7P36544 502 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 RAB9AP51151 201 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 CX3CL1P78423 397 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 RUNX1Q01196 453 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF616Q08AN1 781 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 TMEM267Q0VDI3 215 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 MOGAT2Q3SYC2 334 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 C22orf42Q6IC83 251 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF383Q8NA42 475 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 MINDY2Q8NBR6 621 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR10R2Q8NGX6 335 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR10J5Q8NHC4 309 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR5B12Q96R08 314 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 Q9H521 79 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 METTL1Q9UBP6 276 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 KCNK7Q9Y2U2 307 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 FBXO7Q9Y3I1 522 aa9.62□□□□□ -0.87
CTDNEP1-205ENST00000570828 METTL21EPA6NDL7 271 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 I3L521 148 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 MFNGO00587 321 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 ATP6V1G2O95670 118 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 GHRHP01286 108 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 IGKV1-16P04430 117 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 PSMB9P28065 219 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 RPS16P62249 146 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 GNB1P62873 340 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 ARFRP1Q13795 201 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 KIAA0141Q14154 515 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 PYHIN1Q6K0P9 492 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 CLCC1Q96S66 551 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 CABLES2Q9BTV7 478 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 KRTAP4-7Q9BYR0 210 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR2D2Q9H210 308 aa9.61□□□□□ -0.87
CTDNEP1-205ENST00000570828 A0A0B4J203 849 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 RAB27BO00194 218 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 FCN1O00602 326 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 PROP1O75360 226 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 DIRAS3O95661 229 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 CA2P00918 260 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 OR8U9P0C7N5 309 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 CD40LGP29965 261 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 TALDO1P37837 337 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 ECI1P42126 302 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 CBX3Q13185 183 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 ARL6IP1Q15041 203 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 PSG5Q15238 335 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF260Q3ZCT1 412 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 ACTBL2Q562R1 376 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 IGSF11Q5DX21 431 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 VAX1Q5SQQ9 334 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 UBE2UQ5VVX9 321 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 UNQ5815/PRO19632Q6UWF5 114 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 PPP1R27Q86WC6 154 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 MAFIPQ8WZ33 124 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 FCGR1BQ92637 280 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 FLYWCH2Q96CP2 140 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 GINS4Q9BRT9 223 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 FAM103A1Q9BTL3 118 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 CENPOQ9BU64 300 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 TOLLIPQ9H0E2 274 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 ATG5Q9H1Y0 275 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 GAB2Q9UQC2 676 aa9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 RBM7Q9Y580 266 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-205ENST00000570828 TRBV6-7A0A0A0MS04 114 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 SMIM30A4D0T7 59 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 SLC25A17O43808 307 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 SOX15O60248 233 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms