RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MOB3BQ86TA1 216 aa18.9■□□□□ 0.62
RAB40C-212ENST00000569575 C17orf50Q8WW18 174 aa18.9■□□□□ 0.62
RAB40C-212ENST00000569575 SSX3Q99909 188 aa18.9■□□□□ 0.62
RAB40C-212ENST00000569575 CLDN34H7C241 214 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 NDUFB6O95139 128 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 PDPNQ86YL7 162 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 DYNAPQ8N1N2 210 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 POC5Q8NA72 575 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 MARCH1Q8TCQ1 289 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 CFHR4Q92496 578 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 TBC1D24Q9ULP9 559 aa18.89■□□□□ 0.61
RAB40C-212ENST00000569575 MTORP42345 2549 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 PIGBOS1A0A0B4J2F0 54 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 LINC00854A0A1B0GVQ3 168 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 TIMM23O14925 209 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 RBFOX2O43251 390 aaKnown RBP eCLIP18.88■□□□□ 0.612e-11■■□□□ 12.3
RAB40C-212ENST00000569575 PGLYRP1O75594 196 aaPredicted RBP18.88■□□□□ 0.61
RAB40C-212ENST00000569575 IFITM3Q01628 133 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 DIAPH2-AS1Q14236 149 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 RTL8BQ17RB0 113 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 OR8H1Q8NGG4 311 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 OR2T10Q8NGZ9 312 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 C22orf15Q8WYQ4 148 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 MRGPRFQ96AM1 343 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 AIFM2Q9BRQ8 373 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 MRPL20Q9BYC9 149 aaKnown RBP18.88■□□□□ 0.61
RAB40C-212ENST00000569575 SLC2A9Q9NRM0 540 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 WASHC3Q9Y3C0 194 aa18.88■□□□□ 0.61
RAB40C-212ENST00000569575 IFNA2P01563 188 aa18.87■□□□□ 0.61
RAB40C-212ENST00000569575 REG1BP48304 166 aa18.87■□□□□ 0.61
RAB40C-212ENST00000569575 UBE2MP61081 183 aaKnown RBP18.87■□□□□ 0.61
RAB40C-212ENST00000569575 C16orf82Q7Z2V1 217 aa18.87■□□□□ 0.61
RAB40C-212ENST00000569575 DDB2Q92466 427 aa18.87■□□□□ 0.61
RAB40C-212ENST00000569575 ZNF48Q96MX3 618 aaPredicted RBP18.87■□□□□ 0.61
RAB40C-212ENST00000569575 OCEL1Q9H607 264 aa18.87■□□□□ 0.61
RAB40C-212ENST00000569575 RAB18Q9NP72 206 aa18.87■□□□□ 0.61
RAB40C-212ENST00000569575 LIN7CQ9NUP9 197 aaKnown RBP18.87■□□□□ 0.61
RAB40C-212ENST00000569575 FN1P02751 2386 aaKnown RBP18.86■□□□□ 0.61
RAB40C-212ENST00000569575 FAM240BA0A1B0GVZ2 78 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 H0YJW9 148 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 BTCP35070 178 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 PIGPP57054 158 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 TAS2R31P59538 309 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 SIGLECL1Q8N7X8 197 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 ZNF383Q8NA42 475 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 OR4C13Q8NGP0 309 aa18.86■□□□□ 0.61
RAB40C-212ENST00000569575 MPPED1O15442 326 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 VENTXO95231 258 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 MOSP00540 346 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 F2RP25116 425 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 HILS1P60008 231 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 RPL15P61313 204 aaKnown RBP18.85■□□□□ 0.61
RAB40C-212ENST00000569575 BAMBIQ13145 260 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 DUSP18Q8NEJ0 188 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 C5orf30Q96GV9 206 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 RTBDNQ9BSG5 229 aaPredicted RBP18.85■□□□□ 0.61
RAB40C-212ENST00000569575 ALX4Q9H161 411 aaPredicted RBP18.85■□□□□ 0.61
RAB40C-212ENST00000569575 C5orf66Q9H5L9 145 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 KCNIP3Q9Y2W7 256 aa18.85■□□□□ 0.61
RAB40C-212ENST00000569575 LGALS7P47929 136 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 CCR6P51684 374 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 TMEM128Q5BJH2 165 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 OSR1Q8TAX0 266 aaPredicted RBP18.84■□□□□ 0.61
RAB40C-212ENST00000569575 ENKURQ8TC29 256 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 PIFOQ8TCI5 191 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 TCTEX1D2Q8WW35 142 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 CAPSLQ8WWF8 208 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 FLYWCH2Q96CP2 140 aaKnown RBP18.84■□□□□ 0.61
RAB40C-212ENST00000569575 SLC35D1Q9NTN3 355 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 C1RLQ9NZP8 487 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 VPREB3Q9UKI3 123 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 TCF19Q9Y242 345 aa18.84■□□□□ 0.61
RAB40C-212ENST00000569575 LINC00473A8K010 186 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 H3BUX3 64 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 H7C2Y5 167 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 M0QZK8 103 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 TCRBP04435 133 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 RPA2P15927 270 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 SGPP2Q8IWX5 399 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 CENPSQ8N2Z9 138 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 DRAXINQ8NBI3 349 aaPredicted RBP18.83■□□□□ 0.6
RAB40C-212ENST00000569575 OR4S2Q8NH73 311 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 NUBP2Q9Y5Y2 271 aa18.83■□□□□ 0.6
RAB40C-212ENST00000569575 SOX21Q9Y651 276 aaPredicted RBP18.83■□□□□ 0.6
RAB40C-212ENST00000569575 TCF21O43680 179 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 PTTG1O95997 202 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 SNRNP70P08621 437 aaKnown RBP18.82■□□□□ 0.6
RAB40C-212ENST00000569575 RAG2P55895 527 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 PHLDA2Q53GA4 152 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 TMEM177Q53S58 311 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 TBC1D26Q86UD7 250 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 CADM3Q8N126 398 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 GALNT14Q96FL9 552 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 VSIG4Q9Y279 399 aa18.82■□□□□ 0.6
RAB40C-212ENST00000569575 MDFIC2A0A1B0GVS7 189 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 H0Y980 276 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 HOXA3O43365 443 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-212ENST00000569575 HPRT1P00492 218 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 IGKV1D-33P01593 117 aa18.81■□□□□ 0.6
RAB40C-212ENST00000569575 IGKV1-33P01594 117 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms