RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 NOL4LQ96MY1 436 aaPredicted RBP7.75□□□□□ -1.17
CLN6-209ENST00000569336 SLC35D1Q9NTN3 355 aa7.75□□□□□ -1.17
CLN6-209ENST00000569336 SDHAF2Q9NX18 166 aa7.75□□□□□ -1.17
CLN6-209ENST00000569336 COMMD3Q9UBI1 195 aa7.75□□□□□ -1.17
CLN6-209ENST00000569336 MRPS7Q9Y2R9 242 aaKnown RBP7.75□□□□□ -1.17
CLN6-209ENST00000569336 A0A1W2PRX2 142 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 HLA-DQB1P01920 261 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 ZNF182P17025 639 aaPredicted RBP7.74□□□□□ -1.17
CLN6-209ENST00000569336 CNTFRP26992 372 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 TAS2R46P59540 309 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 CXorf66Q5JRM2 361 aaPredicted RBP7.74□□□□□ -1.17
CLN6-209ENST00000569336 LIN54Q6MZP7 749 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 KCTD9Q7L273 389 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 ZNF329Q86UD4 541 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 TCTEX1D1Q8N7M0 179 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 ZNF383Q8NA42 475 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 OR5AP2Q8NGF4 316 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 BORCS5Q969J3 196 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 FLYWCH2Q96CP2 140 aaKnown RBP7.74□□□□□ -1.17
CLN6-209ENST00000569336 HARBI1Q96MB7 349 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 HSPB9Q9BQS6 159 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 OR51J1Q9H342 316 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 PARP11Q9NR21 331 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 ZFP57Q9NU63 452 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 PRELID3BQ9Y3B1 194 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 SORL1Q92673 2214 aa7.74□□□□□ -1.17
CLN6-209ENST00000569336 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 ATP6V0E1O15342 81 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 CREBL2O60519 120 aaPredicted RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 PROP1O75360 226 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 PF4P02776 101 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 IGKV1-16P04430 117 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 EIF4EP06730 217 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 ELANEP08246 267 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 NFYAP23511 347 aaPredicted RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 PRSS3P35030 304 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 RPL5P46777 297 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 LGALS7P47929 136 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 TMBIM6P55061 237 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 RPS16P62249 146 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 RPL23AP62750 156 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 FOXE3Q13461 319 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 CDK10Q15131 360 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 MSMO1Q15800 293 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 TCTEX1D4Q5JR98 221 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 ZNF660Q6AZW8 331 aaPredicted RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 CLVS1Q8IUQ0 354 aaPredicted RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 GVQW1Q8N7I0 195 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 OSR1Q8TAX0 266 aaPredicted RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 ABHD5Q8WTS1 349 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 HSD17B10Q99714 261 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 NAA50Q9GZZ1 169 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 FBXL15Q9H469 300 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 SCPEP1Q9HB40 452 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 METTL1Q9UBP6 276 aaKnown RBP7.73□□□□□ -1.17
CLN6-209ENST00000569336 SCOCQ9UIL1 159 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 ADAM30Q9UKF2 790 aa7.73□□□□□ -1.17
CLN6-209ENST00000569336 IGHV7-81A0A0B4J1V7 117 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 TRAV41A0A0B4J266 112 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 NUDT19A8MXV4 375 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 FAM25AB3EWG3 89 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 FAM25CB3EWG5 89 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 FAM25GB3EWG6 89 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 SHOXO15266 292 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 SLC25A17O43808 307 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 HPGDSO60760 199 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 TUSC2O75896 110 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 PPYP01298 95 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 IGHG4P01861 327 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 FCGR2CP31995 323 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 DUTP33316 252 aaKnown RBP7.72□□□□□ -1.17
CLN6-209ENST00000569336 HERV-K104P61576 105 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 TMEM267Q0VDI3 215 aaPredicted RBP7.72□□□□□ -1.17
CLN6-209ENST00000569336 PSG5Q15238 335 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 VMA21Q3ZAQ7 101 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 TMEM177Q53S58 311 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 PYHIN1Q6K0P9 492 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 C10orf99Q6UWK7 81 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 OVCH2Q7RTZ1 564 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 PPP1R27Q86WC6 154 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 KLHL30-AS1Q8NEE0 82 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 OR5H2Q8NGV7 314 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 OR4S2Q8NH73 311 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 C15orf40Q8WUR7 153 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 SNAPC3Q92966 411 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 RITA1Q96K30 269 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 EHFQ9NZC4 300 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 ANAPC10Q9UM13 185 aa7.72□□□□□ -1.17
CLN6-209ENST00000569336 RBMX2Q9Y388 322 aaKnown RBP7.72□□□□□ -1.17
CLN6-209ENST00000569336 MEIS3P1A6NDR6 274 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 LINC00473A8K010 186 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 SULT1C2O00338 296 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 RGS5O15539 181 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 TPPPO94811 219 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 CRYZL1O95825 349 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 PTHLHP12272 177 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 ELK1P19419 428 aa7.71□□□□□ -1.18
CLN6-209ENST00000569336 CD33P20138 364 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms