RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 DSCAML1Q8TD84 2053 aa8.71□□□□□ -1.02
CDH3-208ENST00000569036 PKD1P98161 4303 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 A0A1W2PPK0 400 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 PRSS37A4D1T9 235 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 TVP23AA6NH52 213 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 ANKRD30BLA7E2S9 258 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 ZNF736B4DX44 427 aaPredicted RBP8.7□□□□□ -1.02
CDH3-208ENST00000569036 TAAR5O14804 337 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 SLC16A7O60669 478 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 GYPBP06028 91 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 PET100P0DJ07 73 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 PSG2P11465 335 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 BRS3P32247 399 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 RAB5BP61020 215 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 ROM1Q03395 351 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 RNF212Q495C1 297 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 CDNFQ49AH0 187 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 TEX38Q6PEX7 206 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 CALHM1Q8IU99 346 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 OR52B4Q8NGK2 314 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 OR6K6Q8NGW6 343 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 C4orf3Q8WVX3 66 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 TMEM106AQ96A25 262 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 SDSLQ96GA7 329 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 SCGB3A2Q96PL1 93 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 C12orf57Q99622 126 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 ZNF471Q9BX82 626 aaPredicted RBP8.7□□□□□ -1.02
CDH3-208ENST00000569036 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
CDH3-208ENST00000569036 FRRS1LQ9P0K9 344 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 LAMP5Q9UJQ1 280 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 MOB4Q9Y3A3 225 aa8.7□□□□□ -1.02
CDH3-208ENST00000569036 TRAV18A0A075B6X5 111 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 CXorf65A6NEN9 183 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 FAM74A7A6NL05 159 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 M0R135 149 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 CD3DP04234 171 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 S100A9P06702 114 aaKnown RBP8.69□□□□□ -1.02
CDH3-208ENST00000569036 OR8U8P0C7N1 319 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 ALOX5APP20292 161 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 ZBTB25P24278 435 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 GNALP38405 381 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 DHRS2Q13268 280 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 FAM74A3Q4VXF1 159 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 CXorf66Q5JRM2 361 aaPredicted RBP8.69□□□□□ -1.02
CDH3-208ENST00000569036 TEX30Q5JUR7 227 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 ATRAIDQ6UW56 229 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 SERPINA12Q8IW75 414 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 C15orf54Q8N8G6 183 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 OR4D10Q8NGI6 311 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 GLYATL2Q8WU03 294 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 ZNF799Q96GE5 643 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 Q96M85 177 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 INTS14Q96SY0 518 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 NMNAT3Q96T66 252 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 SYT4Q9H2B2 425 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 HIPK2Q9H2X6 1198 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 PNRC2Q9NPJ4 139 aaKnown RBP8.69□□□□□ -1.02
CDH3-208ENST00000569036 HHLA2Q9UM44 414 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 ADAM18Q9Y3Q7 739 aa8.69□□□□□ -1.02
CDH3-208ENST00000569036 NUPR2A6NF83 97 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 XKRYO14609 159 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 BRI3O95415 125 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 SIX6O95475 246 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 RBP4P02753 201 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 BDKRB2P30411 391 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 PJVKQ0ZLH3 352 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 PMS2P11Q13670 270 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 C1orf100Q5SVJ3 147 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 LINC00346Q8IVM7 164 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 BAP18Q8IXM2 172 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 PUSL1Q8N0Z8 303 aaKnown RBP8.68□□□□□ -1.02
CDH3-208ENST00000569036 RNF152Q8N8N0 203 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 OTOSQ8NHW6 89 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 TSEN15Q8WW01 171 aaKnown RBP8.68□□□□□ -1.02
CDH3-208ENST00000569036 OR8B4Q96RC9 309 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 TUBA4BQ9H853 241 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 GRHPRQ9UBQ7 328 aa8.68□□□□□ -1.02
CDH3-208ENST00000569036 IGHV2-26A0A0B4J1V2 119 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 MEX3AA1L020 520 aaKnown RBP8.67□□□□□ -1.02
CDH3-208ENST00000569036 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 OVOL1O14753 267 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 HLA-AP01891 365 aaKnown RBP8.67□□□□□ -1.02
CDH3-208ENST00000569036 ISG15P05161 165 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 IGFBP3P17936 291 aaPredicted RBP8.67□□□□□ -1.02
CDH3-208ENST00000569036 GLRA1P23415 457 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 PSMB6P28072 239 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 HTR1DP28221 377 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 HTR2CP28335 458 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 CLDN12P56749 244 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 C2orf76Q3KRA6 126 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 RNASE10Q5GAN6 216 aaKnown RBP8.67□□□□□ -1.02
CDH3-208ENST00000569036 LGALS9CQ6DKI2 356 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 SLC18B1Q6NT16 456 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 DEGS2Q6QHC5 323 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 ZNF679Q8IYX0 411 aa8.67□□□□□ -1.02
CDH3-208ENST00000569036 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms