RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PPIAL4FP0DN26 164 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 LYL1P12980 280 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 IRF2P14316 349 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 RPA2P15927 270 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 MUC1P15941 1255 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-210ENST00000567654 CCL3L1P16619 93 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 IGFBP2P18065 325 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 F2RP25116 425 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 PSMB6P28072 239 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 IL2RGP31785 369 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF134P52741 427 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 AP2S1P53680 142 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-210ENST00000567654 IAH1Q2TAA2 248 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF585BQ52M93 769 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 NMSQ5H8A3 153 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 OR2B11Q5JQS5 317 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 AVPI1Q5T686 147 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 C6orf183Q5T699 404 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 TMEM65Q6PI78 240 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF546Q86UE3 836 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 FOXRED2Q8IWF2 684 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 FAM185AQ8N0U4 392 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 OR4D5Q8NGN0 318 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 OR1S1Q8NH92 325 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 ASB13Q8WXK3 278 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 DCUN1D4Q92564 292 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 GALMQ96C23 342 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 BSCL2Q96G97 398 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-210ENST00000567654 TMEM56Q96MV1 263 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 GON7Q9BXV9 100 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 C11orf1Q9H5F2 150 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 OR2S2Q9NQN1 319 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 SDHAF2Q9NX18 166 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 CALYQ9NYX4 217 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 KCNIP1Q9NZI2 227 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 GSKIPQ9P0R6 139 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 PPIAL4AQ9Y536 164 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 TMEM56-RWDD3S4R434 201 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 AKAP6Q13023 2319 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 TNCP24821 2201 aa4.7□□□□□ -1.66
SF3B3-210ENST00000567654 UTP20O75691 2785 aaKnown RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 TRAV38-1A0A0B4J264 116 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 IGHV1-69-2A0A0G2JMI3 117 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 RPS10-NUDT3A0A1W2PQS6 291 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 NKX6-3A6NJ46 265 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 LINC00473A8K010 186 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 C17orf98A8MV24 154 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 K7EPK0 472 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ADAM20O43506 726 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 RAMP3O60896 148 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 NDUFS7O75251 213 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 IGKV1-5P01602 117 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 IGHV2-70P01814 119 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 MBPP02686 304 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 SLPIP03973 132 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 WNT2P09544 360 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 NDUFB7P17568 137 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 AGAP20933 346 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 GATA3P23771 443 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 S100A11P31949 105 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 CDKN1AP38936 164 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 PPOXP50336 477 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 DLX1P56177 255 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 S100A10P60903 97 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 HTD2P86397 168 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 SRSF1Q07955 248 aaKnown RBP eCLIP4.69□□□□□ -1.669e-6■□□□□ 8.7
SF3B3-210ENST00000567654 EXOSC2Q13868 293 aaKnown RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 FHL2Q14192 279 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 Q3ZCU0 254 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 MORN2Q502X0 79 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 PRAMEF5Q5TYX0 476 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 PRSS54Q6PEW0 395 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 TEX261Q6UWH6 196 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 CLEC9AQ6UXN8 241 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ODF3L1Q8IXM7 274 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 LGI3Q8N145 548 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF843Q8N446 348 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 KCNRGQ8N5I3 272 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 FAM71E2Q8N5Q1 922 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF645Q8N7E2 425 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF439Q8NDP4 499 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 BEND2Q8NDZ0 799 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF680Q8NEM1 530 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 DMBX1Q8NFW5 382 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 OR8H1Q8NGG4 311 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 OR5D13Q8NGL4 314 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 GPR146Q96CH1 333 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 LRRC46Q96FV0 321 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 AKR1E2Q96JD6 320 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 AGMATQ9BSE5 352 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 EGLN1Q9GZT9 426 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 MFFQ9GZY8 342 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ARL6Q9H0F7 186 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 FAM234AQ9H0X4 552 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 IFI27L2Q9H2X8 130 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 TMPRSS5Q9H3S3 457 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 COMMD9Q9P000 198 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 SLC25A10Q9UBX3 287 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 JPT1Q9UK76 154 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 PSG11Q9UQ72 335 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms