RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 OR6Q1Q8NGQ2 317 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 SECTM1Q8WVN6 248 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 MOB3AQ96BX8 217 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 HSD17B10Q99714 261 aaKnown RBP9.73□□□□□ -0.85
SF3B3-208ENST00000567250 KIAA1456Q9P272 454 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 RBMX2Q9Y388 322 aaKnown RBP9.73□□□□□ -0.85
SF3B3-208ENST00000567250 PRELID3BQ9Y3B1 194 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 MMP24Q9Y5R2 645 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
SF3B3-208ENST00000567250 IGKV1D-13A0A0B4J2D9 117 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 NCBP2LA6PVI3 153 aaKnown RBP9.72□□□□□ -0.85
SF3B3-208ENST00000567250 H0YJW9 148 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 RAB3DO95716 219 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 AKAIN1P0CW23 69 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 IGKV1-13P0DP09 117 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 FAUP35544 74 aaKnown RBP9.72□□□□□ -0.85
SF3B3-208ENST00000567250 AP3S2P59780 193 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 RELBQ01201 579 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 CATR1Q13166 79 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 HNF4GQ14541 408 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 ZNF660Q6AZW8 331 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-208ENST00000567250 STEAP1BQ6NZ63 245 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 LPCAT3Q6P1A2 487 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 DHRS11Q6UWP2 260 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 C12orf54Q6X4T0 127 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 ZNF66Q6ZN08 573 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 LYSMD2Q8IV50 215 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 Q8N402 240 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 Q8N6K4 173 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 RNF5Q99942 180 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 SOSTQ9BQB4 213 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 SLC5A7Q9GZV3 580 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 C16orf95Q9H693 158 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 SLC35D1Q9NTN3 355 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 LIN7CQ9NUP9 197 aaKnown RBP9.72□□□□□ -0.85
SF3B3-208ENST00000567250 PTTG2Q9NZH5 202 aa9.72□□□□□ -0.85
SF3B3-208ENST00000567250 CLPSL1A2RUU4 121 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 NBR2O15453 112 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 PROP1O75360 226 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 PEX14O75381 377 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 SPDEFO95238 335 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 CD74P04233 296 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 CD3DP04234 171 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 DUTP33316 252 aaKnown RBP9.71□□□□□ -0.86
SF3B3-208ENST00000567250 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 AWAT1Q58HT5 328 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 GLDNQ6ZMI3 551 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-208ENST00000567250 CMTM1Q8IZ96 169 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 C5orf56Q8N8D9 126 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF383Q8NA42 475 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 DRAXINQ8NBI3 349 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-208ENST00000567250 DEDD2Q8WXF8 326 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 RASL11BQ9BPW5 248 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 FXYD6Q9H0Q3 95 aa9.71□□□□□ -0.86
SF3B3-208ENST00000567250 DISC1C4P0D8 188 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 M0QYG6 137 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 KCNAB3O43448 404 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 AMY2AP04746 511 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 MDKP21741 143 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-208ENST00000567250 ECI1P42126 302 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 KIR2DS2P43631 304 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-208ENST00000567250 INPP1P49441 399 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF45Q02386 682 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF79Q15937 498 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 ABCA11PQ4W5N1 156 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 SLC38A6Q8IZM9 456 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 Q8N2B8 174 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 LINC01006Q8NI28 216 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 TCTEX1D2Q8WW35 142 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 FLYWCH2Q96CP2 140 aaKnown RBP9.7□□□□□ -0.86
SF3B3-208ENST00000567250 C5orf30Q96GV9 206 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 HARBI1Q96MB7 349 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 TSNAXQ99598 290 aaKnown RBP9.7□□□□□ -0.86
SF3B3-208ENST00000567250 MDFIQ99750 246 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 THAP7Q9BT49 309 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-208ENST00000567250 TINAGL1Q9GZM7 467 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF702PQ9H963 129 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 CCL28Q9NRJ3 127 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 RNF114Q9Y508 228 aa9.7□□□□□ -0.86
SF3B3-208ENST00000567250 ANKRD20A5PA0PJZ0 165 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 GPR31O00270 319 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 NDUFA3O95167 84 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 PLGLAQ15195 96 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 SCGB2B2Q4G0G5 96 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 FBLN7Q53RD9 439 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 C9orf152Q5JTZ5 239 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 TRIQKQ629K1 86 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 ZNF818PQ6ZRF7 136 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 TOMM5Q8N4H5 51 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 FAM71E2Q8N5Q1 922 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 GDPD1Q8N9F7 314 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 Q8N9W7 124 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 POC5Q8NA72 575 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 BVESQ8NE79 360 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 NPBQ8NG41 125 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 OR4S2Q8NH73 311 aa9.69□□□□□ -0.86
SF3B3-208ENST00000567250 SPATA3Q8NHX4 192 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms