RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 FAM90A26D6RGX4 464 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 ARG1P05089 322 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 GZMHP20718 246 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 ZNF134P52741 427 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 ICAM4Q14773 271 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 MORN2Q502X0 79 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 KRTCAP3Q53RY4 240 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 WDR61Q9GZS3 305 aaKnown RBP15.54■□□□□ 0.08
MSLN-207ENST00000566549 PLCE1Q9P212 2302 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 IGLV3-9A0A075B6K5 115 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 A0A1B0GW64 132 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 A0A1W2PPE2 198 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 BTBD17A6NE02 478 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 SCAF4O95104 1147 aaKnown RBP15.54■□□□□ 0.08
MSLN-207ENST00000566549 CD40P25942 277 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 AVPI1Q5T686 147 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 TRAT1Q6PIZ9 186 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 TMEM14EPQ6UXP3 125 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 ZNF66Q6ZN08 573 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 VKORC1L1Q8N0U8 176 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 CYB561D1Q8N8Q1 229 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 PPP1R35Q8TAP8 253 aa15.54■□□□□ 0.08
MSLN-207ENST00000566549 HSD17B10Q99714 261 aaKnown RBP15.54■□□□□ 0.08
MSLN-207ENST00000566549 ZFP92A6NM28 416 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 M0R1X1 148 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 TNFAIP6P98066 277 aaPredicted RBP15.53■□□□□ 0.08
MSLN-207ENST00000566549 ZNF726P1Q15940 193 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 DOLPP1Q86YN1 238 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 CLDND2Q8NHS1 167 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 EDARADDQ8WWZ3 215 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 DCAF16Q9NXF7 216 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 PRELID3BQ9Y3B1 194 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 A0A0G2JNJ9 132 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 A0A1W2PPH5 198 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 CEBPZOSA8MTT3 80 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 LHBP01229 141 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 IGHV1-46P01743 117 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 DUTP33316 252 aaKnown RBP15.53■□□□□ 0.08
MSLN-207ENST00000566549 CFHR2P36980 270 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 ASCL5Q7RTU5 278 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 WFDC8Q8IUA0 241 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 R3HDM4Q96D70 268 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 GCM1Q9NP62 436 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 Q9UFV3 132 aa15.53■□□□□ 0.08
MSLN-207ENST00000566549 SLC31A2O15432 143 aa15.52■□□□□ 0.08
MSLN-207ENST00000566549 SRP19P09132 144 aaKnown RBP15.52■□□□□ 0.08
MSLN-207ENST00000566549 SELENOVP59797 346 aa15.52■□□□□ 0.08
MSLN-207ENST00000566549 RAB2AP61019 212 aa15.52■□□□□ 0.08
MSLN-207ENST00000566549 FOXC1Q12948 553 aa15.52■□□□□ 0.08
MSLN-207ENST00000566549 SP5Q6BEB4 398 aaPredicted RBP15.52■□□□□ 0.08
MSLN-207ENST00000566549 TAF15Q92804 592 aaKnown RBP eCLIP15.52■□□□□ 0.08
MSLN-207ENST00000566549 QTRT1Q9BXR0 403 aaKnown RBP15.52■□□□□ 0.08
MSLN-207ENST00000566549 ZNF665Q9H7R5 613 aa15.52■□□□□ 0.08
MSLN-207ENST00000566549 CALYQ9NYX4 217 aa15.52■□□□□ 0.08
MSLN-207ENST00000566549 RAB29O14966 203 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 HBE1P02100 147 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 OR9G9P0C7N8 305 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 PAX5Q02548 391 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 ZNF787Q6DD87 383 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 FAM90A1Q86YD7 464 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 JPT1Q9UK76 154 aa15.52■□□□□ 0.07
MSLN-207ENST00000566549 PRRG2O14669 202 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 PPIHO43447 177 aaKnown RBP15.51■□□□□ 0.07
MSLN-207ENST00000566549 LOXL3P58215 753 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 DPPA3Q6W0C5 159 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 ZCCHC24Q8N2G6 241 aaKnown RBP15.51■□□□□ 0.07
MSLN-207ENST00000566549 HIST1H2BAQ96A08 127 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 RCC1LQ96I51 464 aaKnown RBP15.51■□□□□ 0.07
MSLN-207ENST00000566549 HMGB3O15347 200 aaKnown RBP15.51■□□□□ 0.07
MSLN-207ENST00000566549 RPS23P62266 143 aaKnown RBP15.51■□□□□ 0.07
MSLN-207ENST00000566549 C15orf54Q8N8G6 183 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 CCL13Q99616 98 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 RNF7Q9UBF6 113 aa15.51■□□□□ 0.07
MSLN-207ENST00000566549 KALRNO60229 2985 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 ROS1P08922 2347 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 GYPAP02724 150 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 RAB13P51153 203 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 CCL8P80075 99 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 ZNF506Q5JVG8 444 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 C1orf229Q6ZS94 237 aaPredicted RBP15.5■□□□□ 0.07
MSLN-207ENST00000566549 PSMG3Q9BT73 122 aaPredicted RBP15.5■□□□□ 0.07
MSLN-207ENST00000566549 IFI27L2Q9H2X8 130 aa15.5■□□□□ 0.07
MSLN-207ENST00000566549 H3BQ15 152 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 TLE1Q04724 770 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 PRR30Q53SZ7 412 aaPredicted RBP15.49■□□□□ 0.07
MSLN-207ENST00000566549 FAM24BQ8N5W8 94 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 FAM216BQ8N7L0 139 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 Q8TCH9 128 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 SNRNP40Q96DI7 357 aaKnown RBP15.49■□□□□ 0.07
MSLN-207ENST00000566549 DOCK11Q5JSL3 2073 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 hCG_1809904A0A1W2PP81 198 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 A0A1W2PR64 198 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 A0A1W2PRV1 198 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 YPEL1O60688 119 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 IFNA17P01571 189 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 IGKV1D-33P01593 117 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 IGKV1-33P01594 117 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 RHEBQ15382 184 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 Q8NA96 180 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 YPEL2Q96QA6 119 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms