RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 SMCO1Q147U7 214 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 THOC7Q6I9Y2 204 aaKnown RBP9.3□□□□□ -0.92
LINC00562-201ENST00000566385 HEPN1Q6WQI6 88 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 VKORC1L1Q8N0U8 176 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 ZNF295-AS1Q8N0V1 137 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 HSD17B10Q99714 261 aaKnown RBP9.3□□□□□ -0.92
LINC00562-201ENST00000566385 E5RGE8 158 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 CHST1O43916 411 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 DLX6P56179 175 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 TMEM33P57088 247 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 ZNF66Q6ZN08 573 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 SPIN2AQ99865 258 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 SPIN2BQ9BPZ2 258 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 GAL3ST2Q9H3Q3 398 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 NSG2Q9Y328 171 aa9.3□□□□□ -0.92
LINC00562-201ENST00000566385 FAM24AA6NFZ4 105 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 PAX9P55771 341 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 SLC25A48Q6ZT89 311 aaKnown RBP9.29□□□□□ -0.92
LINC00562-201ENST00000566385 LSM10Q969L4 123 aaKnown RBP9.29□□□□□ -0.92
LINC00562-201ENST00000566385 ZC4H2Q9NQZ6 224 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 A0A1B0GU03 582 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 H3BP45 60 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 P0C879 139 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 MRPS11P82912 194 aaKnown RBP9.29□□□□□ -0.92
LINC00562-201ENST00000566385 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 MSMO1Q15800 293 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 TMEM155Q4W5P6 130 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 RPL7L1Q6DKI1 246 aaKnown RBP9.29□□□□□ -0.92
LINC00562-201ENST00000566385 SSX9Q7RTT3 188 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 DDB2Q92466 427 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 GSX2Q9BZM3 304 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 FBXL17Q9UF56 701 aa9.29□□□□□ -0.92
LINC00562-201ENST00000566385 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
LINC00562-201ENST00000566385 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 WRBO00258 174 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 RAB29O14966 203 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 NUP62P37198 522 aaPredicted RBP9.28□□□□□ -0.92
LINC00562-201ENST00000566385 RAB7AP51149 207 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 CAV2P51636 162 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 ESCO2Q56NI9 601 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 ZNF383Q8NA42 475 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 NEU4Q8WWR8 484 aaPredicted RBP9.28□□□□□ -0.92
LINC00562-201ENST00000566385 IGSF23A1L1A6 192 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 TEX46H3BTG2 121 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 ITGB1BP1O14713 200 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 OR2C3Q8N628 320 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 SCARB1Q8WTV0 552 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 WFDC1Q9HC57 220 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 MMP24Q9Y5R2 645 aa9.28□□□□□ -0.92
LINC00562-201ENST00000566385 NMBP08949 121 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 P2RY1P47900 373 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 REG1BP48304 166 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 UBA52P62987 128 aaKnown RBP9.27□□□□□ -0.93
LINC00562-201ENST00000566385 NDUFA5Q16718 116 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 MIDNQ504T8 468 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 WDR25Q64LD2 544 aaPredicted RBP9.27□□□□□ -0.93
LINC00562-201ENST00000566385 PLEKHA2Q9HB19 425 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 TET2Q6N021 2002 aaPredicted RBP9.27□□□□□ -0.93
LINC00562-201ENST00000566385 NBPF19A0A087WUL8 3843 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 CST7O76096 145 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 FSTL3O95633 263 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 CT45A6P0DMU7 189 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 CT45A5P0DMU8 189 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 CT45A7P0DMV0 189 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 IGHV1-8P0DP01 117 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 IAPPP10997 89 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 SLC25A6P12236 298 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 TAGLNQ01995 201 aaKnown RBP9.27□□□□□ -0.93
LINC00562-201ENST00000566385 R3HDM4Q96D70 268 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 CXorf58Q96LI9 332 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 CHODLQ9H9P2 273 aa9.27□□□□□ -0.93
LINC00562-201ENST00000566385 WNK2Q9Y3S1 2297 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 C22orf46C9J442 243 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 F12P00748 615 aaPredicted RBP9.26□□□□□ -0.93
LINC00562-201ENST00000566385 IGKV1-16P04430 117 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 OR9G9P0C7N8 305 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 EWSR1Q01844 656 aaKnown RBP eCLIP9.26□□□□□ -0.93
LINC00562-201ENST00000566385 SPINK9Q5DT21 86 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 CLLU1Q5K131 121 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 BAP18Q8IXM2 172 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 TMEM252Q8N6L7 170 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 ZNF525Q8N782 197 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 C17orf50Q8WW18 174 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 TMED6Q8WW62 240 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 RAB1CQ92928 201 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 CITED4Q96RK1 184 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 S1PR3Q99500 378 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 LYRM2Q9NU23 88 aaPredicted RBP9.26□□□□□ -0.93
LINC00562-201ENST00000566385 GAB2Q9UQC2 676 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 POLQO75417 2590 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 TNCP24821 2201 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 PPIAL4CA0A0B4J2A2 164 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 SYNGR2O43760 224 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 GPR137BO60478 399 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 CRYZL1O95825 349 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 PPIAL4GP0DN37 164 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 H2BFWTQ7Z2G1 175 aa9.26□□□□□ -0.93
LINC00562-201ENST00000566385 TMEM217Q8N7C4 229 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms