RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 C2orf68Q2NKX9 166 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 UTF1Q5T230 341 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 GSG1LQ6UXU4 331 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 ODF3L1Q8IXM7 274 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 OR13D1Q8NGV5 346 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 OR51H1Q8NH63 302 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 CD300LFQ8TDQ1 290 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 TMEM186Q96B77 213 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 CLEC7AQ9BXN2 247 aa15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 UNKLQ9H9P5 680 aaKnown RBP15.57■□□□□ 0.08
CSPG4P13-201ENST00000565545 SAA2-SAA4A0A096LPE2 208 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 A0A1W2PPE3 182 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 A8MV72 311 aaPredicted RBP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 SERPINE2P07093 398 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 HNRNPCP07910 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 SAA2P0DJI9 122 aaPredicted RBP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 USF1P22415 310 aaPredicted RBP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 DUTP33316 252 aaKnown RBP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 KIR2DS2P43631 304 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 THBS3P49746 956 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 ARF6P62330 175 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 LCN2P80188 198 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 CYCSP99999 105 aaKnown RBP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 BTNL3Q6UXE8 466 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZNF695Q8IW36 515 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 Q8N7P7 452 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 BEND2Q8NDZ0 799 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 OR10X1Q8NGY0 326 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 FYTTD1Q96QD9 318 aaKnown RBP15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 HEXA-AS1Q9H8Q6 139 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 TMED3Q9Y3Q3 217 aa15.56■□□□□ 0.08
CSPG4P13-201ENST00000565545 IGHV2-26A0A0B4J1V2 119 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 M0R1X1 148 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 PROP1O75360 226 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZNF16P17020 682 aaPredicted RBP15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZNF137PP52743 207 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZNF833PQ6ZTB9 187 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 SELENOHQ8IZQ5 122 aaKnown RBP15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 TCTEX1D2Q8WW35 142 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 RBPMSQ93062 196 aaKnown RBP15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 GPHA2Q96T91 129 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZNF251Q9BRH9 671 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 PRR13Q9NZ81 148 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 PRELID3BQ9Y3B1 194 aa15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 AMMECR1Q9Y4X0 333 aaPredicted RBP15.55■□□□□ 0.08
CSPG4P13-201ENST00000565545 FAM157AC9JC47 383 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 RBFOX2O43251 390 aaKnown RBP eCLIP15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 ATG12O94817 140 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 H2BFSP57053 126 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 RPL30P62888 115 aaKnown RBP15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 TAGLNQ01995 201 aaKnown RBP15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 CD300CQ08708 224 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 RPL39P5Q59GN2 51 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 TMEM268Q5VZI3 342 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 OR11H6Q8NGC7 330 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 C1orf159Q96HA4 380 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 PDCD10Q9BUL8 212 aa15.54■□□□□ 0.08
CSPG4P13-201ENST00000565545 C5orf51A6NDU8 294 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 SIX6O95475 246 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 IGLV1-47P01700 117 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 HOXB5P09067 269 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 VDAC1P21796 283 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 DVL1P1P54792 670 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 HLA-DRB5Q30154 266 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 GGNBP1Q5YKI7 109 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 LHFPL5Q8TAF8 219 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 TMEM158Q8WZ71 300 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 C2orf50Q96LR7 162 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 CHIAQ9BZP6 476 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 NMES1Q9C002 83 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 SIRPDQ9H106 197 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 RANBP3Q9H6Z4 567 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 ARHGAP32A7KAX9 2087 aa15.53■□□□□ 0.08
CSPG4P13-201ENST00000565545 C13orf42A0A1B0GVH6 325 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 LINC00473A8K010 186 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 FAM25EA8MYX2 175 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 CCSO14618 274 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 CD5LO43866 347 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 ADAP1O75689 374 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 C1QBP02746 253 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 LPAR6P43657 344 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 LOXL1Q08397 574 aaPredicted RBP15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 ZNF585BQ52M93 769 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 DCAF12L2Q5VW00 463 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 NCR3LG1Q68D85 454 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 LYZL2Q7Z4W2 148 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 SPAG16Q8N0X2 631 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 SLC35G3Q8N808 338 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 ST6GALNAC6Q969X2 333 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 SPIN2AQ99865 258 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 SPIN2BQ9BPZ2 258 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 MMP26Q9NRE1 261 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 INSIG2Q9Y5U4 225 aa15.52■□□□□ 0.08
CSPG4P13-201ENST00000565545 FGL1Q08830 312 aa15.51■□□□□ 0.07
CSPG4P13-201ENST00000565545 ZFP69Q49AA0 526 aa15.51■□□□□ 0.07
CSPG4P13-201ENST00000565545 C1orf229Q6ZS94 237 aaPredicted RBP15.51■□□□□ 0.07
CSPG4P13-201ENST00000565545 VMO1Q7Z5L0 202 aa15.51■□□□□ 0.07
CSPG4P13-201ENST00000565545 PNKDQ8N490 385 aa15.51■□□□□ 0.07
CSPG4P13-201ENST00000565545 OR2T35Q8NGX2 323 aa15.51■□□□□ 0.07
CSPG4P13-201ENST00000565545 DDB2Q92466 427 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms