RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 RRASP10301 218 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 IGLL1P15814 213 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 PSMB8P28062 276 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 RAB25P57735 213 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 TMEM267Q0VDI3 215 aaPredicted RBP9.64□□□□□ -0.87
SPG7-211ENST00000565370 ZNF260Q3ZCT1 412 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
SPG7-211ENST00000565370 CNIH2Q6PI25 160 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 ETV3LQ6ZN32 361 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 H1FOOQ8IZA3 346 aaPredicted RBP9.64□□□□□ -0.87
SPG7-211ENST00000565370 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 SLC25A38Q96DW6 304 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 RBMXL1Q96E39 390 aaKnown RBP9.64□□□□□ -0.87
SPG7-211ENST00000565370 RITA1Q96K30 269 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 HARBI1Q96MB7 349 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 SDHAF2Q9NX18 166 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 SPATA2Q9UM82 520 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 GAB2Q9UQC2 676 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 WSB1Q9Y6I7 421 aa9.64□□□□□ -0.87
SPG7-211ENST00000565370 A0A1W2PN81 502 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 SLC25A17O43808 307 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 IGKV1-16P04430 117 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 CD40LGP29965 261 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 CHRNA7P36544 502 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 CBX5P45973 191 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 CDX1P47902 265 aaPredicted RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 LGALS7P47929 136 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 LUMP51884 338 aaPredicted RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 CRIP2P52943 208 aaPredicted RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 CX3CL1P78423 397 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 PSG5Q15238 335 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 UBE2NLQ5JXB2 153 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 PYHIN1Q6K0P9 492 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 MRPL41Q8IXM3 137 aaKnown RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 ZNF645Q8N7E2 425 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 ARPC1AQ92747 370 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 YIPF6Q96EC8 236 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 FOXA2Q9Y261 457 aaPredicted RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 MRPS7Q9Y2R9 242 aaKnown RBP9.63□□□□□ -0.87
SPG7-211ENST00000565370 A3GALT2U3KPV4 340 aa9.63□□□□□ -0.87
SPG7-211ENST00000565370 TRAV18A0A075B6X5 111 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 CCL24O00175 119 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 SHOXO15266 292 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 CREBL2O60519 120 aaPredicted RBP9.62□□□□□ -0.87
SPG7-211ENST00000565370 CA2P00918 260 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 LSM3P62310 102 aaKnown RBP9.62□□□□□ -0.87
SPG7-211ENST00000565370 NDPQ00604 133 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 FOXB2Q5VYV0 432 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 KCTD9Q7L273 389 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 BEST4Q8NFU0 473 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 OR5M8Q8NGP6 311 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 OR5H6Q8NGV6 325 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 CLCC1Q96S66 551 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 P2RX4Q99571 388 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 IFT46Q9NQC8 304 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
SPG7-211ENST00000565370 ANXA10Q9UJ72 324 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 VSIG4Q9Y279 399 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 PRELID3BQ9Y3B1 194 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 OR2W1Q9Y3N9 320 aa9.62□□□□□ -0.87
SPG7-211ENST00000565370 IGKV1D-8A0A087WSZ0 117 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 G3V318 75 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 PROP1O75360 226 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 NFYAP23511 347 aaPredicted RBP9.61□□□□□ -0.87
SPG7-211ENST00000565370 PPIFP30405 207 aaKnown RBP9.61□□□□□ -0.87
SPG7-211ENST00000565370 VMA21Q3ZAQ7 101 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 ACTBL2Q562R1 376 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 C18orf65Q6ZTR6 163 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 PPP1R27Q86WC6 154 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 MRAPQ8TCY5 172 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 KCTD12Q96CX2 325 aaKnown RBP9.61□□□□□ -0.87
SPG7-211ENST00000565370 S100A16Q96FQ6 103 aaKnown RBP9.61□□□□□ -0.87
SPG7-211ENST00000565370 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
SPG7-211ENST00000565370 TRIM64CA6NLI5 447 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 SSX5O60225 188 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 CNIH1O95406 144 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 CRYZL1O95825 349 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 IGLV1-40P01703 118 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 OR8U8P0C7N1 319 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 DUTP33316 252 aaKnown RBP9.6□□□□□ -0.87
SPG7-211ENST00000565370 TGFBR1P36897 503 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 GNB1P62873 340 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 TMEM177Q53S58 311 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 TMEM69Q5SWH9 247 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 UNQ5815/PRO19632Q6UWF5 114 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 MINDY2Q8NBR6 621 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 BVESQ8NE79 360 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 OSR1Q8TAX0 266 aaPredicted RBP9.6□□□□□ -0.87
SPG7-211ENST00000565370 MYOZ3Q8TDC0 251 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 FUNDC2Q9BWH2 189 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 AUNIPQ9H7T9 357 aa9.6□□□□□ -0.87
SPG7-211ENST00000565370 AURKAIP1Q9NWT8 199 aaPredicted RBP9.6□□□□□ -0.87
SPG7-211ENST00000565370 J3QRK9 145 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms