RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ZNF729A6NN14 1252 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 H0Y980 276 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 M0QYV0 167 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 IGKV1D-33P01593 117 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 IGKV1-33P01594 117 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 PFN1P07737 140 aaKnown RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 MIPP30301 263 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 AGTR1P30556 359 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 CDK9P50750 372 aaKnown RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 SLC9A3R2Q15599 337 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 NDUFA5Q16718 116 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 TMEM176BQ3YBM2 270 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 IGFL3Q6UXB1 125 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 LRRN1Q6UXK5 716 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 ADM2Q7Z4H4 148 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 NEK7Q8TDX7 302 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 LZICQ8WZA0 190 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 RMI2Q96E14 147 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 RMND5BQ96G75 393 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 KCTD7Q96MP8 289 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 NIPSNAP1Q9BPW8 284 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 GNB1LQ9BYB4 327 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 FAM107BQ9H098 131 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 ARL6Q9H0F7 186 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 ALX4Q9H161 411 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 OR2D2Q9H210 308 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 TRABDQ9H4I3 376 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 SMPXQ9UHP9 88 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 GUCA1BQ9UMX6 200 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 ARID1AO14497 2285 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 SLIT2O94813 1529 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 CLIP1P30622 1438 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 PCM1Q15154 2024 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 MYOM2P54296 1465 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 NUP155O75694 1391 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 TMEM2Q9UHN6 1383 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 DYSFO75923 2080 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 METTL15A6NJ78 407 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 M0QZ92 97 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 FADS1O60427 444 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 IFNGR2P38484 337 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 IDH3GP51553 393 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 RANP62826 216 aaKnown RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 TAF1AQ15573 450 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 KRTAP13-3Q3SY46 172 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 ACSM3Q53FZ2 586 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 SPIN3Q5JUX0 258 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 HENMT1Q5T8I9 393 aaKnown RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 SCGB1D4Q6XE38 83 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 CYHR1Q6ZMK1 362 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.41□□□□□ -2.18
CHD9-209ENST00000564255 FER1L6-AS1Q8NA97 138 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 TNFAIP8L1Q8WVP5 186 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 GALMQ96C23 342 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 OR2V2Q96R30 315 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 C11orf49Q9H6J7 331 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 XPNPEP1Q9NQW7 623 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 CMTM6Q9NX76 183 aa1.41□□□□□ -2.18
CHD9-209ENST00000564255 MYO5CQ9NQX4 1742 aa1.4□□□□□ -2.18
CHD9-209ENST00000564255 THADAQ6YHU6 1953 aa1.4□□□□□ -2.18
CHD9-209ENST00000564255 DHX57Q6P158 1386 aaKnown RBP1.4□□□□□ -2.18
CHD9-209ENST00000564255 ABCC11Q96J66 1382 aa1.4□□□□□ -2.18
CHD9-209ENST00000564255 ADGRB3O60242 1522 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 ARHGAP5Q13017 1502 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.4□□□□□ -2.19
CHD9-209ENST00000564255 TGOLN2O43493 480 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 GPR75O95800 540 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 UGT2B7P16662 529 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 GADD45AP24522 165 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 PSMA1P25786 263 aaKnown RBP1.4□□□□□ -2.19
CHD9-209ENST00000564255 TMEM33P57088 247 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 PSME3P61289 254 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 SMAGPQ0VAQ4 97 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 SRSF6Q13247 344 aaKnown RBP1.4□□□□□ -2.19
CHD9-209ENST00000564255 SMCO1Q147U7 214 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 PDZD11Q5EBL8 140 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 CENPWQ5EE01 88 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 BRMS1LQ5PSV4 323 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 HACD4Q5VWC8 232 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 LPCAT4Q643R3 524 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 LYG2Q86SG7 212 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 CLVS1Q8IUQ0 354 aaPredicted RBP1.4□□□□□ -2.19
CHD9-209ENST00000564255 OR10J5Q8NHC4 309 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 PIGXQ8TBF5 258 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 RBPMSQ93062 196 aaKnown RBP1.4□□□□□ -2.19
CHD9-209ENST00000564255 STACQ99469 402 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 TMEM208Q9BTX3 173 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 GTSF1LQ9H1H1 148 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 GID8Q9NWU2 228 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 FAM206AQ9NX38 181 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 ARL5AQ9Y689 179 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 RREB1Q92766 1687 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 NRKQ7Z2Y5 1582 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 CEP152O94986 1710 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 WDR90Q96KV7 1748 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 NAV1Q8NEY1 1877 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 KIDINS220Q9ULH0 1771 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 TULP4Q9NRJ4 1543 aa1.4□□□□□ -2.19
CHD9-209ENST00000564255 THSD7AQ9UPZ6 1657 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms