RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 IGKV1-39P01597 117 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 IGKV1D-39P04432 117 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 CT45A6P0DMU7 189 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 CT45A5P0DMU8 189 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 CT45A7P0DMV0 189 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 HLA-GP17693 338 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 EIF2B2P49770 351 aaKnown RBP8.25□□□□□ -1.09
SMG1-208ENST00000563448 CD83Q01151 205 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 OR2B11Q5JQS5 317 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 DCAF12L2Q5VW00 463 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 PDZD9Q8IXQ8 264 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 LGI3Q8N145 548 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 ZNF383Q8NA42 475 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 WFDC11Q8NEX6 87 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 DDB2Q92466 427 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 WDR89Q96FK6 387 aaPredicted RBP8.25□□□□□ -1.09
SMG1-208ENST00000563448 RANGRFQ9HD47 186 aaPredicted RBP8.25□□□□□ -1.09
SMG1-208ENST00000563448 ASH1LQ9NR48 2969 aaKnown RBP8.25□□□□□ -1.09
SMG1-208ENST00000563448 NAV2Q8IVL1 2488 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 LY6LH3BQJ8 138 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 RAMP3O60896 148 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 ARG1P05089 322 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 HOXB5P09067 269 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 H2BFSP57053 126 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 LDLRAD2Q5SZI1 272 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 TMEM268Q5VZI3 342 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 LYZL2Q7Z4W2 148 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 LINC01356Q8N9X3 169 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 OR5M8Q8NGP6 311 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 FYTTD1Q96QD9 318 aaKnown RBP8.25□□□□□ -1.09
SMG1-208ENST00000563448 ZNF436Q9C0F3 470 aaPredicted RBP8.25□□□□□ -1.09
SMG1-208ENST00000563448 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
SMG1-208ENST00000563448 A0A1W2PRD5 423 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 A0A1W2PRF3 423 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 A0A1W2PRM7 423 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 MPTX1A8MV57 137 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 IL3RAP26951 378 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 LPAR6P43657 344 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 REG1BP48304 166 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 THBS3P49746 956 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 SRPXP78539 464 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 ZNF695Q8IW36 515 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 SPAG16Q8N0X2 631 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 TCTEX1D1Q8N7M0 179 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 SLC35G3Q8N808 338 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 LHX4Q969G2 390 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 RBMXL1Q96E39 390 aaKnown RBP8.24□□□□□ -1.09
SMG1-208ENST00000563448 MRPL20Q9BYC9 149 aaKnown RBP8.24□□□□□ -1.09
SMG1-208ENST00000563448 FAM212BQ9NTI7 297 aaPredicted RBP8.24□□□□□ -1.09
SMG1-208ENST00000563448 UNC79Q9P2D8 2635 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 ITPR2Q14571 2701 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 TRAV20A0A0B4J274 112 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 FCGR3BO75015 233 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 ZNF816Q0VGE8 651 aaPredicted RBP8.24□□□□□ -1.09
SMG1-208ENST00000563448 TMEM249Q2WGJ8 235 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 GGNBP1Q5YKI7 109 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 LHFPL4Q7Z7J7 247 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 RBPMSQ93062 196 aaKnown RBP8.24□□□□□ -1.09
SMG1-208ENST00000563448 IL22RA2Q969J5 263 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 ADTRPQ96IZ2 230 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 OR10C1Q96KK4 312 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 NABP2Q9BQ15 211 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 CHIAQ9BZP6 476 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 HIF1ANQ9NWT6 349 aa8.24□□□□□ -1.09
SMG1-208ENST00000563448 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
SMG1-208ENST00000563448 HECTD1Q9ULT8 2610 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 CSMD1Q96PZ7 3565 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 OR2A4O95047 310 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 S1PR2O95136 353 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 SERPINE2P07093 398 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 HTR1DP28221 377 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 UBE2E1P51965 193 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 THOC7Q6I9Y2 204 aaKnown RBP8.23□□□□□ -1.09
SMG1-208ENST00000563448 GSG1LQ6UXU4 331 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 SEC22AQ96IW7 307 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 OR2A7Q96R45 310 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 PRELID3BQ9Y3B1 194 aa8.23□□□□□ -1.09
SMG1-208ENST00000563448 A0A0G2JRQ6 117 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 CENPVL3A0A0U1RRI6 287 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 C13orf42A0A1B0GVH6 325 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 DUXBA0A1W2PPF3 345 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 C5orf51A6NDU8 294 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 RPA2P15927 270 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 KIR2DS2P43631 304 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 SRSF4Q08170 494 aaKnown RBP8.22□□□□□ -1.09
SMG1-208ENST00000563448 TPTE2P1Q5T6R2 138 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 CIARTQ8N365 385 aaPredicted RBP8.22□□□□□ -1.09
SMG1-208ENST00000563448 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 DPM3Q9P2X0 92 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 AUP1Q9Y679 476 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 LEUTXA8MZ59 168 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 H0YJW9 148 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 SMLR1H3BR10 107 aa8.22□□□□□ -1.09
SMG1-208ENST00000563448 RBFOX2O43251 390 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMG1-208ENST00000563448 HPRT1P00492 218 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms