RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 RPS16P62249 146 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 TMED1Q13445 227 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 PDPNQ86YL7 162 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 OR2C3Q8N628 320 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 POM121L12Q8N7R1 296 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 ZNF383Q8NA42 475 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 DRAXINQ8NBI3 349 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 UXS1Q8NBZ7 420 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 OR1L6Q8NGR2 347 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 CANT1Q8WVQ1 401 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 C4orf36Q96KX1 117 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 RARRES2Q99969 163 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 PDCD1LG2Q9BQ51 273 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 JAM3Q9BX67 310 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 SPACA1Q9HBV2 294 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 PEX16Q9Y5Y5 336 aa5.63□□□□□ -1.51
HERPUD1-206ENST00000563343 DNAH5Q8TE73 4624 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 UBE2QL1A1L167 161 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 E9PI62 339 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 ITGB1BP1O14713 200 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 DEFB4AO15263 64 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 ZNF780AO75290 641 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 GLAP06280 429 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 GTF2F2P13984 249 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 CPEP16870 476 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 ZNF93P35789 620 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 ATP5G2Q06055 141 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 SLC22A6Q4U2R8 563 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 PVRIGQ6DKI7 326 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 THRSPQ92748 146 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 GALMQ96C23 342 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 NRBF2Q96F24 287 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 GALNT14Q96FL9 552 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 CCDC140Q96MF4 163 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 HRH4Q9H3N8 390 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 ISG20L2Q9H9L3 353 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 KCNIP1Q9NZI2 227 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 TAGLN3Q9UI15 199 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
HERPUD1-206ENST00000563343 TMEM212A6NML5 194 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 SRRM4A7MD48 611 aaKnown RBP5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 C16orf90A8MZG2 172 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 J3QLW9 94 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 TUSC2O75896 110 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 OR2J3O76001 311 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 AMBPP02760 352 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 ZNF19P17023 458 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 ATP6V1E1P36543 226 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 MNAT1P51948 309 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 C15orf32Q32M92 178 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 DDI2Q5TDH0 399 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 ZNF880Q6PDB4 577 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 UNQ9165/PRO28630Q6UXU0 137 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 ARHGAP24Q8N264 748 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 NECAP1Q8NC96 275 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 OR11H2Q8NH07 326 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 OR5AK2Q8NH90 309 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 ASB9Q96DX5 294 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 NSL1Q96IY1 281 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 SPAG8Q99932 426 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 RNF126Q9BV68 326 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 RIBC2Q9H4K1 309 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 TMEM138Q9NPI0 162 aa5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 PAK1IP1Q9NWT1 392 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-206ENST00000563343 DAPL1A0PJW8 107 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 AQP12BA6NM10 295 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 TSPAN4O14817 238 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 FAM107AO95990 144 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 RPSAP08865 295 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 P0DMU3 169 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 FAM231AP0DMU4 169 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 FAM231CP0DMU5 169 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 IGFBP3P17936 291 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 FUT3P21217 361 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 POLR2IP36954 125 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 CAPGP40121 348 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 SOX2P48431 317 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 ZNF124Q15973 351 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 FAM209BQ5JX69 171 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 SLC25A30Q5SVS4 291 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 KDM4DQ6B0I6 523 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 Q6ZRM9 215 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 Q6ZTC4 211 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 AQP12AQ8IXF9 295 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 TTC9CQ8N5M4 171 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 Q8NAQ8 132 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 IL1F10Q8WWZ1 152 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 SRSF12Q8WXF0 261 aaKnown RBP5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 MARC2Q969Z3 335 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 ORAI1Q96D31 301 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 Q96M66 194 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 PHB2Q99623 299 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 C11orf54Q9H0W9 315 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 CSTL1Q9H114 145 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 BANF2Q9H503 90 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 C5orf66Q9H5L9 145 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 ARGLU1Q9NWB6 273 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 STEAP1Q9UHE8 339 aa5.6□□□□□ -1.51
HERPUD1-206ENST00000563343 LRRC42Q9Y546 428 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms