RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 HSPB9Q9BQS6 159 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 GON7Q9BXV9 100 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 IFT46Q9NQC8 304 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 NECAP2Q9NVZ3 263 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 ZNF107Q9UII5 783 aaPredicted RBP13.05□□□□□ -0.32
CDT1-202ENST00000562747 ZNF580Q9UK33 172 aa13.05□□□□□ -0.32
CDT1-202ENST00000562747 LINC01548A6NM66 108 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 RRHO14718 337 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 HPGDSO60760 199 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 TUSC2O75896 110 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 PRSS3P35030 304 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 THBS3P49746 956 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 LINC00205P59089 165 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 NSUN5P1Q3KNT7 163 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 TCTEX1D4Q5JR98 221 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 REC114Q7Z4M0 266 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 COMMD1Q8N668 190 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 OR5AP2Q8NGF4 316 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 SNAPC3Q92966 411 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 ADTRPQ96IZ2 230 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 SLC35D1Q9NTN3 355 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 LINC00527Q9UJ94 153 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 ANAPC10Q9UM13 185 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 TSSC4Q9Y5U2 329 aaPredicted RBP13.04□□□□□ -0.32
CDT1-202ENST00000562747 RYR3Q15413 4870 aa13.04□□□□□ -0.32
CDT1-202ENST00000562747 TCRBV4S1A1TA0A5B7 111 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 SPDEFO95238 335 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 IGKV1-16P04430 117 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 IGF1P05019 195 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 RRASP10301 218 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 ELK1P19419 428 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 SPCS2Q15005 226 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 LIN54Q6MZP7 749 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 FLYWCH2Q96CP2 140 aaKnown RBP13.03□□□□□ -0.32
CDT1-202ENST00000562747 TSNAXQ99598 290 aaKnown RBP13.03□□□□□ -0.32
CDT1-202ENST00000562747 AURKAIP1Q9NWT8 199 aaPredicted RBP13.03□□□□□ -0.32
CDT1-202ENST00000562747 SCOCQ9UIL1 159 aa13.03□□□□□ -0.32
CDT1-202ENST00000562747 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 J3QRK9 145 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 NOL3O60936 208 aaKnown RBP13.02□□□□□ -0.33
CDT1-202ENST00000562747 OR5H8P0DN80 308 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 DUTP33316 252 aaKnown RBP13.02□□□□□ -0.33
CDT1-202ENST00000562747 RPS16P62249 146 aaKnown RBP13.02□□□□□ -0.33
CDT1-202ENST00000562747 CBX3Q13185 183 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 PLGLAQ15195 96 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 RTL8BQ17RB0 113 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 DDB2Q92466 427 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 OR51J1Q9H342 316 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 FBXL15Q9H469 300 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 MRPS7Q9Y2R9 242 aaKnown RBP13.02□□□□□ -0.33
CDT1-202ENST00000562747 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.33
CDT1-202ENST00000562747 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 IGKV1D-13A0A0B4J2D9 117 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 FAM25AB3EWG3 89 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 FAM25CB3EWG5 89 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 FAM25GB3EWG6 89 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 FCER2P06734 321 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 IGKV1-13P0DP09 117 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 NAT1P18440 290 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 VDAC1P21796 283 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 FCGR2CP31995 323 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 LGALS7P47929 136 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 CDK10Q15131 360 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 PSG5Q15238 335 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 MSMO1Q15800 293 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 TEX38Q6PEX7 206 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 GPX8Q8TED1 209 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 GIMAP1Q8WWP7 306 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 SCPEP1Q9HB40 452 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 ADAM30Q9UKF2 790 aa13.01□□□□□ -0.33
CDT1-202ENST00000562747 RBMX2Q9Y388 322 aaKnown RBP13.01□□□□□ -0.33
CDT1-202ENST00000562747 SULT1C2O00338 296 aa13□□□□□ -0.33
CDT1-202ENST00000562747 TPPPO94811 219 aa13□□□□□ -0.33
CDT1-202ENST00000562747 PPYP01298 95 aa13□□□□□ -0.33
CDT1-202ENST00000562747 IGLV2-14P01704 120 aa13□□□□□ -0.33
CDT1-202ENST00000562747 TAS2R46P59540 309 aa13□□□□□ -0.33
CDT1-202ENST00000562747 CFHR3Q02985 330 aa13□□□□□ -0.33
CDT1-202ENST00000562747 TMEM177Q53S58 311 aa13□□□□□ -0.33
CDT1-202ENST00000562747 ZNF660Q6AZW8 331 aaPredicted RBP13□□□□□ -0.33
CDT1-202ENST00000562747 BVESQ8NE79 360 aa13□□□□□ -0.33
CDT1-202ENST00000562747 R3HDM4Q96D70 268 aa13□□□□□ -0.33
CDT1-202ENST00000562747 ZFP57Q9NU63 452 aa13□□□□□ -0.33
CDT1-202ENST00000562747 CCDC59Q9P031 241 aaKnown RBP13□□□□□ -0.33
CDT1-202ENST00000562747 METTL1Q9UBP6 276 aaKnown RBP13□□□□□ -0.33
CDT1-202ENST00000562747 LINC00473A8K010 186 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 ATP6V0E1O15342 81 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 AADACP22760 399 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 SNX29P2Q8IUI4 249 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 DYNC2LI1Q8TCX1 351 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 ISOC1Q96CN7 298 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 HARBI1Q96MB7 349 aa12.99□□□□□ -0.33
CDT1-202ENST00000562747 HSD17B10Q99714 261 aaKnown RBP12.99□□□□□ -0.33
CDT1-202ENST00000562747 PARP11Q9NR21 331 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms