RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
SF3B3-202ENST00000562722 EBAG9O00559 213 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 LGALS7P47929 136 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 MRPS15P82914 257 aaKnown RBP9.93□□□□□ -0.82
SF3B3-202ENST00000562722 QRFPP83859 136 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 MED22Q15528 200 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 MOGAT2Q3SYC2 334 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 LAIR2Q6ISS4 152 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 PTX4Q96A99 478 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 HARBI1Q96MB7 349 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 PHB2Q99623 299 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 CMSS1Q9BQ75 279 aaKnown RBP9.93□□□□□ -0.82
SF3B3-202ENST00000562722 EDA2RQ9HAV5 297 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 Q9N2K0 584 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 PLCXD1Q9NUJ7 323 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 COA4Q9NYJ1 87 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 RDH8Q9NYR8 311 aa9.93□□□□□ -0.82
SF3B3-202ENST00000562722 LYSTQ99698 3801 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 A8MZ25 164 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 PTGES3LE9PB15 166 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 PROP1O75360 226 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 APELAP0DMC3 54 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 AADACP22760 399 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 VEGFCP49767 419 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 PJVKQ0ZLH3 352 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 KLF5Q13887 457 aaPredicted RBP9.92□□□□□ -0.82
SF3B3-202ENST00000562722 RCN1Q15293 331 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 SPHARQ15513 63 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 RAB11BQ15907 218 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 HAGHQ16775 308 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 LCN12Q6JVE5 192 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 TMEM203Q969S6 136 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 ARHGAP5-AS1Q96IT6 56 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 PEF1Q9UBV8 284 aaKnown RBP9.92□□□□□ -0.82
SF3B3-202ENST00000562722 HSF4Q9ULV5 492 aa9.92□□□□□ -0.82
SF3B3-202ENST00000562722 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 IGKV1-6A0A0C4DH72 117 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 TRDCB7Z8K6 153 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 BET1O15155 118 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 SHOXO15266 292 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 MPPED1O15442 326 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 CDK1P06493 297 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 UCHL1P09936 223 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 LIPKQ5VXJ0 399 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-202ENST00000562722 BVESQ8NE79 360 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 UFD1Q92890 307 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 TMEM68Q96MH6 324 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 PECRQ9BY49 303 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 TINAGL1Q9GZM7 467 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-202ENST00000562722 OR2D2Q9H210 308 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 FKBP14Q9NWM8 211 aa9.91□□□□□ -0.82
SF3B3-202ENST00000562722 AK6Q9Y3D8 172 aaKnown RBP9.91□□□□□ -0.82
SF3B3-202ENST00000562722 RBM7Q9Y580 266 aaKnown RBP9.91□□□□□ -0.82
SF3B3-202ENST00000562722 A0A0B4J203 849 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 SLC17A2O00624 439 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 CD3GP09693 182 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 HSMCR30P0CW71 290 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 SERPINB10P48595 397 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 CLDN12P56749 244 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 RTL8BQ17RB0 113 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 IL34Q6ZMJ4 242 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 Q8N402 240 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 FAM89BQ8N5H3 189 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 OR56B1Q8NGI3 324 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 OR4A4PQ8NGN8 299 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 OR10J5Q8NHC4 309 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 ADAM30Q9UKF2 790 aa9.9□□□□□ -0.82
SF3B3-202ENST00000562722 HYDINQ4G0P3 5121 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 FABP7O15540 132 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 JTBO76095 146 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 IGLV2-23P01705 113 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 TRBV12-3P01733 135 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 SSBP2P81877 361 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-202ENST00000562722 DYRK1AQ13627 763 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 TNXAQ16473 311 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 RNLSQ5VYX0 342 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 ZNF343Q6P1L6 599 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 USMG5Q96IX5 58 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 VCXQ9H320 206 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 RETNQ9HD89 108 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 SDHAF2Q9NX18 166 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 SCN3BQ9NY72 215 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 PEMTQ9UBM1 199 aa9.89□□□□□ -0.83
SF3B3-202ENST00000562722 IZUMO1RA6ND01 250 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 MSGN1A6NI15 193 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 FOXI3A8MTJ6 420 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-202ENST00000562722 DENRO43583 198 aaKnown RBP9.88□□□□□ -0.83
SF3B3-202ENST00000562722 ARL6IP5O75915 188 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 OR2A4O95047 310 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 CRYGBP07316 175 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 CSN3P07498 182 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 CD37P11049 281 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 TMEM50BP56557 158 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 CD81P60033 236 aa9.88□□□□□ -0.83
SF3B3-202ENST00000562722 RPS25P62851 125 aaKnown RBP9.88□□□□□ -0.83
SF3B3-202ENST00000562722 TAGLNQ01995 201 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms