RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PROK2Q9HC23 129 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 Q9N2K0 584 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 NPDC1Q9NQX5 325 aaPredicted RBP6.45□□□□□ -1.38
TCF4-216ENST00000562680 FREM3P0C091 2139 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 SSSCA1O60232 199 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 FOLR2P14207 255 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 HOXA5P20719 270 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 F2RP25116 425 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 OTX1P32242 354 aaPredicted RBP6.45□□□□□ -1.38
TCF4-216ENST00000562680 FHL1Q13642 323 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 ACOT6Q3I5F7 207 aaPredicted RBP6.45□□□□□ -1.38
TCF4-216ENST00000562680 NHLRC3Q5JS37 347 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 CLEC18BQ6UXF7 455 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 SNRNP40Q96DI7 357 aaKnown RBP6.45□□□□□ -1.38
TCF4-216ENST00000562680 HSPB7Q9UBY9 170 aa6.45□□□□□ -1.38
TCF4-216ENST00000562680 ODAMA1E959 279 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 FCGR3BO75015 233 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 KLK2P20151 261 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 HERPUD1Q15011 391 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 IGFL2Q6UWQ7 119 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 SPSB4Q96A44 273 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 JPT1Q9UK76 154 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 ACKR3P25106 362 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 DVL1P1P54792 670 aaPredicted RBP6.44□□□□□ -1.38
TCF4-216ENST00000562680 PSG7Q13046 419 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 TBC1D26Q86UD7 250 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 NIT1Q86X76 327 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 MOB3AQ96BX8 217 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 WBP1Q96G27 269 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 KLHDC3Q9BQ90 382 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 SERTAD4Q9NUC0 356 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 GNG13Q9P2W3 67 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 SHISA3A0PJX4 238 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 SNRPCP09234 159 aaKnown RBP6.44□□□□□ -1.38
TCF4-216ENST00000562680 ZNF816Q0VGE8 651 aaPredicted RBP6.44□□□□□ -1.38
TCF4-216ENST00000562680 C3orf36Q3SXR2 165 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 FFAR4Q5NUL3 377 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 BAGE3Q86Y29 109 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 BAGE2Q86Y30 109 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 TGIF2LYQ8IUE0 185 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 TMEM217Q8N7C4 229 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 FAM213BQ8TBF2 198 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 STARD4Q96DR4 205 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 ZNF714Q96N38 554 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 RCL1Q9Y2P8 373 aaKnown RBP6.44□□□□□ -1.38
TCF4-216ENST00000562680 A0A1B0GU03 582 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 A0A1W2PP11 408 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 DKK1O94907 266 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 MPC2O95563 127 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 KRASP01116 189 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 WNT5AP41221 380 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 TAS2R45P59539 299 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 OR2G3Q8NGZ4 309 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 GPR132Q9UNW8 380 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 ZFP30Q9Y2G7 519 aa6.44□□□□□ -1.38
TCF4-216ENST00000562680 USF1P22415 310 aaPredicted RBP6.43□□□□□ -1.38
TCF4-216ENST00000562680 GAPTQ8N292 157 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 FAM222BQ8WU58 562 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 ZNF488Q96MN9 340 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 PRNDQ9UKY0 176 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 AUP1Q9Y679 476 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 CEACAM4O75871 244 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 CLDN14O95500 239 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 OR13C7P0DN81 318 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 PAX5Q02548 391 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 ZNF154Q13106 437 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 SIGLECL1Q8N7X8 197 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 HIST1H2BAQ96A08 127 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 PRR32B1ATL7 298 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 ATXN7O15265 892 aaPredicted RBP6.43□□□□□ -1.38
TCF4-216ENST00000562680 LANCL1O43813 399 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 COX5AP20674 150 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 AESQ08117 197 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 SP6Q3SY56 376 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 AWAT1Q58HT5 328 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 LDLRAD2Q5SZI1 272 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 IL22RA2Q969J5 263 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 MEGF9Q9H1U4 602 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 CCL28Q9NRJ3 127 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 OTOGLQ3ZCN5 2332 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 IGHV1-69-2A0A0G2JMI3 117 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 H0Y980 276 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 K7N7A8 449 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 MMP9P14780 707 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 TM4SF5O14894 197 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 HBZP02008 142 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 LIPFP07098 398 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 ZNF355PQ9NSJ1 428 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 CACNG5Q9UF02 275 aa6.43□□□□□ -1.38
TCF4-216ENST00000562680 GAGE10A6NGK3 116 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 P2RY1P47900 373 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 UNC119Q13432 240 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 MBNL2Q5VZF2 373 aaKnown RBP6.42□□□□□ -1.38
TCF4-216ENST00000562680 UBALD1Q8TB05 177 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 MBD3L1Q8WWY6 194 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ZDHHC16Q969W1 377 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 ABHD14AQ9BUJ0 271 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 C7orf77A4D0Y5 90 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 C17orf100A8MU93 164 aa6.42□□□□□ -1.38
TCF4-216ENST00000562680 IGHV3-13P01766 116 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms