RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 MRPL18Q9H0U6 180 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 R4GN57 208 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 IGLV3-32A0A0A0MS00 114 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 RNF212BA8MTL3 300 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 SPRY1O43609 319 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 NRASP01111 189 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 KRASP01116 189 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 NPPCP23582 126 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 Q0VFX4 171 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 SLC25A53Q5H9E4 307 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 DCAF12Q5T6F0 453 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 FADS6Q8N9I5 356 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 LYZL4Q96KX0 146 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 MRPL13Q9BYD1 178 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 NRN1Q9NPD7 142 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 DNAJC13O75165 2243 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 PGPEP1LA6NFU8 196 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 OR5B21A6NL26 309 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 FAM166BA8MTA8 275 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 RIPPLY3P57055 190 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF430Q9H8G1 570 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-203ENST00000562609 IGHV1-69-2A0A0G2JMI3 117 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 M0R296 226 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 IAPPP10997 89 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 CD99P14209 185 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 IZUMO4Q1ZYL8 232 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 PRR27Q6MZM9 219 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 OR10V1Q8NGI7 309 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 NCKAP5O14513 1909 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 ZIC3O60481 467 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF253O75346 499 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 SP9P0CG40 484 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 AMTP48728 403 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 RHOGP84095 191 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 PDCD1Q15116 288 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 YRDCQ86U90 279 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 GAPTQ8N292 157 aa11.88□□□□□ -0.51
GTF3C1-203ENST00000562609 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 IGLC7A0M8Q6 106 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 K7ERU9 68 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 IGHG1P01857 330 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 SNAI3Q3KNW1 292 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 PPP1R32Q7Z5V6 425 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 OR56B2PQ8NGI1 322 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 PIGLQ9Y2B2 252 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 IGHV2-26A0A0B4J1V2 119 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 CD46P15529 392 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 PMCHP20382 165 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 HOXC12P31275 282 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 EIF3IQ13347 325 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 OR4A47Q6IF82 309 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 HAPLN4Q86UW8 402 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF114Q8NC26 417 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 CT55Q8WUE5 264 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 RAB40CQ96S21 281 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 LRFN3Q9BTN0 628 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 DPRXA6NFQ7 191 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 TNFSF11O14788 317 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 RFPL3SP0C7P2 107 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 LIFP15018 202 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 ACP1P24666 158 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 PIGYQ3MUY2 71 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 PHYHD1Q5SRE7 291 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 Q6ZPA2 131 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 UHRF2Q96PU4 802 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 DERL1Q9BUN8 251 aa11.87□□□□□ -0.51
GTF3C1-203ENST00000562609 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 A0A1W2PNU3 283 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 FCN1O00602 326 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.512e-8■□□□□ 10.9
GTF3C1-203ENST00000562609 CRYAAP02489 173 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 NBEAP1P0C6P0 100 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 UCP1P25874 307 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 PSG4Q00888 419 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 TAF15Q92804 592 aaKnown RBP eCLIP11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 DOCK7Q96N67 2140 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 OXGR1Q96P68 337 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 PNRC2Q9NPJ4 139 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 ODAMA1E959 279 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 KITLGP21583 273 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 HBG1P69891 147 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 HBG2P69892 147 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms