RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ATP5IP56385 69 aaPredicted RBP6.28□□□□□ -1.4
CFDP1-202ENST00000562602 NDUFA6P56556 154 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 PSG7Q13046 419 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 EIF4EBP1Q13541 118 aaPredicted RBP6.28□□□□□ -1.4
CFDP1-202ENST00000562602 P2RY6Q15077 328 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 C3orf36Q3SXR2 165 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 MBNL2Q5VZF2 373 aaKnown RBP6.28□□□□□ -1.4
CFDP1-202ENST00000562602 NCR3LG1Q68D85 454 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 KCNIP4Q6PIL6 250 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 ACP7Q6ZNF0 438 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 OR10A7Q8NGE5 316 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 OR10G9Q8NGN4 311 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 OR10G7Q8NGN6 311 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 KLF14Q8TD94 323 aaPredicted RBP6.28□□□□□ -1.4
CFDP1-202ENST00000562602 DTD1Q8TEA8 209 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 RAB1CQ92928 201 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 ACY3Q96HD9 319 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 DIRC2Q96SL1 478 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 IMMP2LQ96T52 175 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 PFDN5Q99471 154 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 RSG1Q9BU20 258 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 HES7Q9BYE0 225 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 DEFB127Q9H1M4 99 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 OR2D2Q9H210 308 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 DOK5Q9P104 306 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 CLCF1Q9UBD9 225 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 MIOXQ9UGB7 285 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 U3KQE9 123 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 SHANK1Q9Y566 2161 aa6.28□□□□□ -1.4
CFDP1-202ENST00000562602 TRAV17A0A0B4J275 112 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 A0A1W2PPE3 182 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 MED19A0JLT2 244 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 LNP1A1A4G5 178 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 AHRRA9YTQ3 701 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 C12orf77C9JDV5 145 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 H3BP45 60 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 H7BYZ3 331 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 TIMM8AO60220 97 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 HPRT1P00492 218 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 GRPP07492 148 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 FGF7P21781 194 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 IGHV1-2P23083 117 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 OR3A1P47881 315 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 TNFSF10P50591 281 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 RAB7AP51149 207 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 IDH3GP51553 393 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 FAM3BP58499 235 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 SPCS3P61009 180 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 ERVK-16P61578 105 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 LCN2P80188 198 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 GUSBP1Q15486 140 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 BSXQ3C1V8 233 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 PDLIM3Q53GG5 364 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 WDR25Q64LD2 544 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 SLC16A13Q7RTY0 426 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 PRR18Q8N4B5 295 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 TMEM105Q8N8V8 129 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 CORO2AQ92828 525 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 NEIL1Q96FI4 390 aaPredicted RBP6.27□□□□□ -1.41
CFDP1-202ENST00000562602 PYGO2Q9BRQ0 406 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 ZNF665Q9H7R5 613 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 SPRR3Q9UBC9 169 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 JPT1Q9UK76 154 aa6.27□□□□□ -1.41
CFDP1-202ENST00000562602 DMXL1Q9Y485 3027 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 KMT2EQ8IZD2 1858 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 MUC6Q6W4X9 2439 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 MED12Q93074 2177 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 UBE2L5PA0A1B0GUS4 154 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 ODAMA1E959 279 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 OR5H1A6NKK0 313 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 ZNF729A6NN14 1252 aaPredicted RBP6.26□□□□□ -1.41
CFDP1-202ENST00000562602 PPP5D1E7EU14 171 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 FNDC10F2Z333 226 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 MGST3O14880 152 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 YPEL1O60688 119 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 RBMXL2O75526 392 aaKnown RBP6.26□□□□□ -1.41
CFDP1-202ENST00000562602 NXPH3O95157 252 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 MT-CO2P00403 227 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 KRASP01116 189 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 IFNA10P01566 189 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 GABRA2P47869 451 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 TMPRSS3P57727 454 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 ERVFRD-1P60508 538 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
CFDP1-202ENST00000562602 ARL16Q0P5N6 197 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 RAB31Q13636 194 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 ZNF726P1Q15940 193 aa6.26□□□□□ -1.41
CFDP1-202ENST00000562602 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms