RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 B8ZZF3 427 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 DVL1O14640 695 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 NDUFB3O43676 98 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 NDUFA2O43678 99 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 SOD3P08294 240 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 ZNF816Q0VGE8 651 aaPredicted RBP13.63□□□□□ -0.23
PKD1-225ENST00000562297 SMUG1Q53HV7 270 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 PRAMEF5Q5TYX0 476 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 RPL7L1Q6DKI1 246 aaKnown RBP13.63□□□□□ -0.23
PKD1-225ENST00000562297 CLEC9AQ6UXN8 241 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 ODF3L1Q8IXM7 274 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
PKD1-225ENST00000562297 ZC4H2Q9NQZ6 224 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
PKD1-225ENST00000562297 NXPH3O95157 252 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 GAPDHP04406 335 aaKnown RBP13.62□□□□□ -0.23
PKD1-225ENST00000562297 DANCRP0C864 163 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 MMP9P14780 707 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 RAB7AP51149 207 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 PAX9P55771 341 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 LRRC10Q5BKY1 277 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 STPG2Q8N412 459 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 OR2C3Q8N628 320 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 ZNF251Q9BRH9 671 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 LYRM2Q9NU23 88 aaPredicted RBP13.62□□□□□ -0.23
PKD1-225ENST00000562297 COA4Q9NYJ1 87 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 DOPEY1Q5JWR5 2465 aa13.62□□□□□ -0.23
PKD1-225ENST00000562297 A0A1W2PPE3 182 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 C19orf84I3L1E1 186 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 CHST1O43916 411 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 IGFBP2P18065 325 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 NFYBP25208 207 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 ERVFRD-1P60508 538 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 NHLH2Q02577 135 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 OR10A7Q8NGE5 316 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 MS4A7Q9GZW8 240 aaPredicted RBP13.61□□□□□ -0.23
PKD1-225ENST00000562297 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 SAA2-SAA4A0A096LPE2 208 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 IGSF23A1L1A6 192 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 KRBOX1C9JBD0 128 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 M0R1X1 148 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 KRASP01116 189 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 IGHV2-70P01814 119 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 SAA2P0DJI9 122 aaPredicted RBP13.61□□□□□ -0.23
PKD1-225ENST00000562297 CCL3L1P16619 93 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 PVALBP20472 110 aaPredicted RBP13.61□□□□□ -0.23
PKD1-225ENST00000562297 G6PCP35575 357 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 DTX2Q86UW9 622 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 EIF4E3Q8N5X7 224 aaKnown RBP13.61□□□□□ -0.23
PKD1-225ENST00000562297 DDB2Q92466 427 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 ZNF714Q96N38 554 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 SMIM3Q9BZL3 60 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 GAL3ST2Q9H3Q3 398 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 WFDC1Q9HC57 220 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 ASH1LQ9NR48 2969 aaKnown RBP13.61□□□□□ -0.23
PKD1-225ENST00000562297 MYO18BQ8IUG5 2567 aa13.61□□□□□ -0.23
PKD1-225ENST00000562297 FAM24AA6NFZ4 105 aa13.6□□□□□ -0.23
PKD1-225ENST00000562297 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.23
PKD1-225ENST00000562297 MIDNQ504T8 468 aa13.6□□□□□ -0.23
PKD1-225ENST00000562297 SLC25A48Q6ZT89 311 aaKnown RBP13.6□□□□□ -0.23
PKD1-225ENST00000562297 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.6□□□□□ -0.23
PKD1-225ENST00000562297 LPAR3Q9UBY5 353 aa13.6□□□□□ -0.23
PKD1-225ENST00000562297 DLX6P56179 175 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 UBAC2Q8NBM4 344 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 TMED6Q8WW62 240 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 RAB1BQ9H0U4 201 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 AKAP6Q13023 2319 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 RAB29O14966 203 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.23
PKD1-225ENST00000562297 JTBO76095 146 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 CAV2P51636 162 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 TMEM252Q8N6L7 170 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
PKD1-225ENST00000562297 ARV1Q9H2C2 271 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 LAMP3Q9UQV4 416 aa13.59□□□□□ -0.23
PKD1-225ENST00000562297 LOC105371267A0A1B0GV96 52 aa13.58□□□□□ -0.24
PKD1-225ENST00000562297 TOR1AO14656 332 aa13.58□□□□□ -0.24
PKD1-225ENST00000562297 LY6HO94772 140 aa13.58□□□□□ -0.24
PKD1-225ENST00000562297 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
PKD1-225ENST00000562297 RAB40CQ96S21 281 aa13.58□□□□□ -0.24
PKD1-225ENST00000562297 MARCH11A6NNE9 402 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 WRBO00258 174 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 FGF16O43320 207 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 SYNGR2O43760 224 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 FCGR3BO75015 233 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 ATG12O94817 140 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 FAM157CP0CG43 387 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 GNG10P50151 68 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 VAMP2P63027 116 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 EIF5AP63241 154 aaKnown RBP13.57□□□□□ -0.24
PKD1-225ENST00000562297 TMEM155Q4W5P6 130 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
PKD1-225ENST00000562297 DAOP14920 347 aa13.57□□□□□ -0.24
PKD1-225ENST00000562297 MRPS11P82912 194 aaKnown RBP13.57□□□□□ -0.24
PKD1-225ENST00000562297 LYG1Q8N1E2 194 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms