RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 TRGV3P03979 118 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 OR8U9P0C7N5 309 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 HSMCR30P0CW71 290 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 VEGFCP49767 419 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 SSBP2P81877 361 aaPredicted RBP8.93□□□□□ -0.98
USP3-220ENST00000561381 PITPNAQ00169 270 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 DEFA5Q01523 94 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 PJVKQ0ZLH3 352 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 FXYD3Q14802 87 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 RAB11BQ15907 218 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 SRSF7Q16629 238 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP3-220ENST00000561381 CASC10Q5T4H9 136 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 PYHIN1Q6K0P9 492 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 OR6Q1Q8NGQ2 317 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 UFD1Q92890 307 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
USP3-220ENST00000561381 CMSS1Q9BQ75 279 aaKnown RBP8.93□□□□□ -0.98
USP3-220ENST00000561381 PECRQ9BY49 303 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 GHITMQ9H3K2 345 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 C12orf4Q9NQ89 552 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 GAR1Q9NY12 217 aaKnown RBP8.93□□□□□ -0.98
USP3-220ENST00000561381 ZNF221Q9UK13 617 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 HSF4Q9ULV5 492 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 M0R1X1 148 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 IGLV2-23P01705 113 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 TFAP2AP05549 437 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 PDPNQ86YL7 162 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 OR5T1Q8NG75 326 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 OR4C12Q96R67 309 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 TSNAXQ99598 290 aaKnown RBP8.92□□□□□ -0.98
USP3-220ENST00000561381 SLA2Q9H6Q3 261 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 ZNF355PQ9NSJ1 428 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 SCN3BQ9NY72 215 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 RDH8Q9NYR8 311 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 NKX1-2Q9UD57 310 aaPredicted RBP8.92□□□□□ -0.98
USP3-220ENST00000561381 KCNK7Q9Y2U2 307 aa8.92□□□□□ -0.98
USP3-220ENST00000561381 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.91□□□□□ -0.98
USP3-220ENST00000561381 TRDCB7Z8K6 153 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 SPDEFO95238 335 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 APOA2P02652 100 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 CALRP27797 417 aaKnown RBP8.91□□□□□ -0.98
USP3-220ENST00000561381 AQP4P55087 323 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 FABP5Q01469 135 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 TPBGQ13641 420 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 C2orf76Q3KRA6 126 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 IGSF11Q5DX21 431 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 Q8N1Y9 231 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 POC5Q8NA72 575 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 FAM3DQ96BQ1 224 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 C5orf30Q96GV9 206 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 RSRP1Q9BUV0 290 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 SLC35D1Q9NTN3 355 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 MGAT4AQ9UM21 535 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 TENM2Q9NT68 2774 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 RYR2Q92736 4967 aa8.91□□□□□ -0.98
USP3-220ENST00000561381 DYNC2H1Q8NCM8 4307 aaKnown RBP8.91□□□□□ -0.98
USP3-220ENST00000561381 SACSQ9NZJ4 4579 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 TMEM272A0A1B0GTI8 110 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 BET1O15155 118 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 LDLRAD4O15165 306 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 CNIH1O95406 144 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 IGLV1-51P01701 117 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 CRYGBP07316 175 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 IGHV4-30-4P0DP06 118 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 CD40LGP29965 261 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 MAP2K4P45985 399 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 MOGAT2Q3SYC2 334 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 HES5Q5TA89 166 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 OR56B1Q8NGI3 324 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 MAFIPQ8WZ33 124 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 KRTAP9-2Q9BYQ4 174 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 OR2D2Q9H210 308 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 VCXQ9H320 206 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 DUSP21Q9H596 190 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 SDHAF2Q9NX18 166 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 ADAM30Q9UKF2 790 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 STUB1Q9UNE7 303 aa8.9□□□□□ -0.98
USP3-220ENST00000561381 C13orf42A0A1B0GVH6 325 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 SRRM4A7MD48 611 aaKnown RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 FABP7O15540 132 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 DENRO43583 198 aaKnown RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 RBMXL2O75526 392 aaKnown RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 ARL6IP5O75915 188 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 FCGR3AP08637 254 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 GSTT2P0CG29 244 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 GSTT2BP0CG30 244 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 APELAP0DMC3 54 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 OR10A3P58181 314 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 MLLT11Q13015 90 aaPredicted RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 MRGPRG-AS1Q2M3A8 158 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 IL34Q6ZMJ4 242 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.89□□□□□ -0.99
USP3-220ENST00000561381 OR4A4PQ8NGN8 299 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 HARBI1Q96MB7 349 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 TM2D3Q9BRN9 247 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 ELOVL1Q9BW60 279 aa8.89□□□□□ -0.99
USP3-220ENST00000561381 ZMAT4Q9H898 229 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms