RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 RAB25P57735 213 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 DEFA5Q01523 94 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 FHL3Q13643 280 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 ARFRP1Q13795 201 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 LIN54Q6MZP7 749 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 MINDY2Q8NBR6 621 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 C4orf3Q8WVX3 66 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 YIPF6Q96EC8 236 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 RHBDL2Q9NX52 303 aa9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 METTL1Q9UBP6 276 aaKnown RBP9.84□□□□□ -0.83
CHRNA3-208ENST00000561128 A0A1W2PN81 502 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 SRRM4A7MD48 611 aaKnown RBP9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 LINC00473A8K010 186 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 I3L521 148 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 SLC25A17O43808 307 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 IGLV2-14P01704 120 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 FCER2P06734 321 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 CRYGBP07316 175 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 CHRNA7P36544 502 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 CDX1P47902 265 aaPredicted RBP9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 KIR2DS1Q14954 304 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 Q6ZS49 121 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 ZNF491Q8N8L2 437 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 DDB2Q92466 427 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 GPHA2Q96T91 129 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 SLC35D1Q9NTN3 355 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 KIAA1456Q9P272 454 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 ZNF221Q9UK13 617 aa9.83□□□□□ -0.84
CHRNA3-208ENST00000561128 GSTP1P09211 210 aaKnown RBP9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 NFYAP23511 347 aaPredicted RBP9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 DTYMKP23919 212 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 LSM3P62310 102 aaKnown RBP9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 PLGLAQ15195 96 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 IDNKQ5T6J7 187 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 HACD4Q5VWC8 232 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 TPRA1Q86W33 373 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 GVQW1Q8N7I0 195 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 BVESQ8NE79 360 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 OR10J5Q8NHC4 309 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 ST6GALNAC5Q9BVH7 336 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 NUBP2Q9Y5Y2 271 aa9.82□□□□□ -0.84
CHRNA3-208ENST00000561128 METTL21EPA6NDL7 271 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 RBMXL2O75526 392 aaKnown RBP9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 MC5RP33032 325 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 SERPINB10P48595 397 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 RPS16P62249 146 aaKnown RBP9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 RPL30P62888 115 aaKnown RBP9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 MRPS15P82914 257 aaKnown RBP9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 OR2B11Q5JQS5 317 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 REC114Q7Z4M0 266 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 PDPNQ86YL7 162 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 ABHD5Q8WTS1 349 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 GINS4Q9BRT9 223 aa9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 FOXA2Q9Y261 457 aaPredicted RBP9.81□□□□□ -0.84
CHRNA3-208ENST00000561128 TRIM64CA6NLI5 447 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 RBBP9O75884 186 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 SPDEFO95238 335 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 DIRAS3O95661 229 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 APOA2P02652 100 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 SMIM18P0DKX4 95 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 DUTP33316 252 aaKnown RBP9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 TALDO1P37837 337 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 RAB9AP51151 201 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 SLURP1P55000 103 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 BRWD1-AS2P59051 145 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 EIF4EBP1Q13541 118 aaPredicted RBP9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 SRSF7Q16629 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 ZNF660Q6AZW8 331 aaPredicted RBP9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 IDO2Q6ZQW0 420 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 PPP1R27Q86WC6 154 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 LFNGQ8NES3 379 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 OR11H1Q8NG94 326 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 ARPC1AQ92747 370 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 SNAPC3Q92966 411 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 HARBI1Q96MB7 349 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 MS4A10Q96PG2 267 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 GON7Q9BXV9 100 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 SPATA2Q9UM82 520 aa9.8□□□□□ -0.84
CHRNA3-208ENST00000561128 TRAV18A0A075B6X5 111 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 IGHV4OR15-8A0A075B7B6 117 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 A0A087WW49 117 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 MEIS3P1A6NDR6 274 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 APELAP0DMC3 54 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 OR5H8P0DN80 308 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 SLC6A1P30531 599 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 GNG2P59768 71 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 TAGLNQ01995 201 aaKnown RBP9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 TMEM177Q53S58 311 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 C10orf55Q5SWW7 151 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 C11orf87Q6NUJ2 197 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 UNQ5815/PRO19632Q6UWF5 114 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 TSPAN14Q8NG11 270 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 FLYWCH2Q96CP2 140 aaKnown RBP9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 UBE2E2Q96LR5 201 aa9.79□□□□□ -0.84
CHRNA3-208ENST00000561128 TSNAXQ99598 290 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms