RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CD40LGP29965 261 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 LGALS7P47929 136 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
LMX1B-204ENST00000561065 NDPQ00604 133 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 FOXE3Q13461 319 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 RTL8BQ17RB0 113 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-204ENST00000561065 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 RNF167Q9H6Y7 350 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 TMEM235A6NFC5 223 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 H0YJW9 148 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 M0R1X1 148 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 SPDEFO95238 335 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 IGHG4P01861 327 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 PSMB8P28062 276 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 RPS19P39019 145 aaKnown RBP12.47□□□□□ -0.41
LMX1B-204ENST00000561065 MYCNOSP40205 109 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
LMX1B-204ENST00000561065 ARPC4P59998 168 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 LSM3P62310 102 aaKnown RBP12.47□□□□□ -0.41
LMX1B-204ENST00000561065 UBE2NLQ5JXB2 153 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 CMTM3Q96MX0 182 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 FUNDC2Q9BWH2 189 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 OR2D2Q9H210 308 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 ANXA10Q9UJ72 324 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 OR2W1Q9Y3N9 320 aa12.47□□□□□ -0.41
LMX1B-204ENST00000561065 IGHV7-81A0A0B4J1V7 117 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 G3V318 75 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 RRHO14718 337 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 XRCC3O43542 346 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 NDUFA3O95167 84 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 RORCP51449 518 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 MZT2AQ6P582 158 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 GLDNQ6ZMI3 551 aaPredicted RBP12.46□□□□□ -0.41
LMX1B-204ENST00000561065 H1FOOQ8IZA3 346 aaPredicted RBP12.46□□□□□ -0.41
LMX1B-204ENST00000561065 MAFIPQ8WZ33 124 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 AP3S1Q92572 193 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 SLC25A46Q96AG3 418 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 GPR61Q9BZJ8 451 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 OR51J1Q9H342 316 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 SLC35D1Q9NTN3 355 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 PRELID3BQ9Y3B1 194 aa12.46□□□□□ -0.41
LMX1B-204ENST00000561065 CCL24O00175 119 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 PROP1O75360 226 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
LMX1B-204ENST00000561065 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
LMX1B-204ENST00000561065 TMEM69Q5SWH9 247 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 SAMD12Q8N8I0 201 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 DRAXINQ8NBI3 349 aaPredicted RBP12.45□□□□□ -0.42
LMX1B-204ENST00000561065 OR13F1Q8NGS4 319 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 OR5H6Q8NGV6 325 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 NUDCD2Q8WVJ2 157 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 BORCS5Q969J3 196 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 MRPS26Q9BYN8 205 aaKnown RBP12.45□□□□□ -0.42
LMX1B-204ENST00000561065 KLK15Q9H2R5 256 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 AUNIPQ9H7T9 357 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 SDHAF2Q9NX18 166 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 FBXO7Q9Y3I1 522 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 WSB1Q9Y6I7 421 aa12.45□□□□□ -0.42
LMX1B-204ENST00000561065 FHL3Q13643 280 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 KIAA0141Q14154 515 aaPredicted RBP12.44□□□□□ -0.42
LMX1B-204ENST00000561065 C19orf54Q5BKX5 351 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 ANKRD13BQ86YJ7 626 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 BEST4Q8NFU0 473 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 IFT46Q9NQC8 304 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 PARP11Q9NR21 331 aa12.44□□□□□ -0.42
LMX1B-204ENST00000561065 METTL1Q9UBP6 276 aaKnown RBP12.44□□□□□ -0.42
LMX1B-204ENST00000561065 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
LMX1B-204ENST00000561065 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 SHOXO15266 292 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 RAB25P57735 213 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 LINC00205P59089 165 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 ASPHD1Q5U4P2 390 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 GPR141Q7Z602 305 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 ABHD5Q8WTS1 349 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 C4orf3Q8WVX3 66 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 SLC25A38Q96DW6 304 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 AIFM2Q9BRQ8 373 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 MCRIP2Q9BUT9 160 aaKnown RBP12.43□□□□□ -0.42
LMX1B-204ENST00000561065 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 GNB4Q9HAV0 340 aa12.43□□□□□ -0.42
LMX1B-204ENST00000561065 ELF5Q9UKW6 265 aaPredicted RBP12.43□□□□□ -0.42
LMX1B-204ENST00000561065 MRPS7Q9Y2R9 242 aaKnown RBP12.43□□□□□ -0.42
LMX1B-204ENST00000561065 SOX15O60248 233 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 CREBL2O60519 120 aaPredicted RBP12.42□□□□□ -0.42
LMX1B-204ENST00000561065 CNIH1O95406 144 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 APOA1P02647 267 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 PRSS3P35030 304 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 VBP1P61758 197 aa12.42□□□□□ -0.42
LMX1B-204ENST00000561065 PSG5Q15238 335 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms