RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ZFP69Q49AA0 526 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 FAM71F2Q6NXP2 309 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 GSG1LQ6UXU4 331 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 NOXA1Q86UR1 476 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 LYG1Q8N1E2 194 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 ZNF383Q8NA42 475 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 RBPMSQ93062 196 aaKnown RBP9.19□□□□□ -0.94
SNX1-212ENST00000560861 NMES1Q9C002 83 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 MMP26Q9NRE1 261 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 TMED3Q9Y3Q3 217 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 KPTNQ9Y664 436 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 CR1P17927 2039 aa9.19□□□□□ -0.94
SNX1-212ENST00000560861 ODF3BA8MYP8 253 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 PDZD2O15018 2839 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 RAMP3O60896 148 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 CT45A6P0DMU7 189 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 CT45A5P0DMU8 189 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 CT45A7P0DMV0 189 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 RPA2P15927 270 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 VDAC1P21796 283 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 DNASE1P24855 282 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 LPAR6P43657 344 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 THBS3P49746 956 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 ARF6P62330 175 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 LCN2P80188 198 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 CLEC12BQ2HXU8 276 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 HLA-DRB5Q30154 266 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 LAMTOR1Q6IAA8 161 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 ZBTB8BQ8NAP8 495 aaPredicted RBP9.18□□□□□ -0.94
SNX1-212ENST00000560861 BEND2Q8NDZ0 799 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 OR11H6Q8NGC7 330 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 TCTEX1D2Q8WW35 142 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
SNX1-212ENST00000560861 SEC22AQ96IW7 307 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 METTL8Q9H825 291 aaKnown RBP9.18□□□□□ -0.94
SNX1-212ENST00000560861 ONECUT1Q9UBC0 465 aa9.18□□□□□ -0.94
SNX1-212ENST00000560861 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 hCG_1809904A0A1W2PP81 198 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 A0A1W2PPE2 198 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 A0A1W2PR64 198 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 A0A1W2PRV1 198 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 PITX3O75364 302 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 EIF2B2P49770 351 aaKnown RBP9.17□□□□□ -0.94
SNX1-212ENST00000560861 NKX2-5P52952 324 aaPredicted RBP9.17□□□□□ -0.94
SNX1-212ENST00000560861 PRB3Q04118 309 aaPredicted RBP9.17□□□□□ -0.94
SNX1-212ENST00000560861 DIAPH2-AS1Q14236 149 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 LDLRAD2Q5SZI1 272 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 DRAXINQ8NBI3 349 aaPredicted RBP9.17□□□□□ -0.94
SNX1-212ENST00000560861 OR4P4Q8NGL7 312 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 OR4D5Q8NGN0 318 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 ADTRPQ96IZ2 230 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 TBX15Q96SF7 602 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 S1PR3Q99500 378 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 NABP2Q9BQ15 211 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 CLEC7AQ9BXN2 247 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 MRPL20Q9BYC9 149 aaKnown RBP9.17□□□□□ -0.94
SNX1-212ENST00000560861 RANBP3Q9H6Z4 567 aaPredicted RBP9.17□□□□□ -0.94
SNX1-212ENST00000560861 INSIG2Q9Y5U4 225 aa9.17□□□□□ -0.94
SNX1-212ENST00000560861 ITPR3Q14573 2671 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 PIGBOS1A0A0B4J2F0 54 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 C13orf42A0A1B0GVH6 325 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 C5orf51A6NDU8 294 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 FAM25EA8MYX2 175 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 RNASEK-C17orf49H0YIS7 233 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 H0YIZ8 118 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 S1PR2O95136 353 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 MPC2O95563 127 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 IFNA21P01568 189 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 SERPINE2P07093 398 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 SLC25A4P12235 298 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 SLC25A6P12236 298 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 LYL1P12980 280 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 ZNF16P17020 682 aaPredicted RBP9.16□□□□□ -0.94
SNX1-212ENST00000560861 KIR2DS2P43631 304 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 DVL1P1P54792 670 aaPredicted RBP9.16□□□□□ -0.94
SNX1-212ENST00000560861 CYCSP99999 105 aaKnown RBP9.16□□□□□ -0.94
SNX1-212ENST00000560861 PAX8Q06710 450 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 IAH1Q2TAA2 248 aaPredicted RBP9.16□□□□□ -0.94
SNX1-212ENST00000560861 MIDNQ504T8 468 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 OR2B11Q5JQS5 317 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 Q6ZRM9 215 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 PNKDQ8N490 385 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 C9orf62Q8N4C0 152 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 OR5AN1Q8NGI8 311 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 CD300LFQ8TDQ1 290 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 PPP1R1CQ8WVI7 109 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 TMEM186Q96B77 213 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 HYLS1Q96M11 299 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 RNF126Q9BV68 326 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 C11orf1Q9H5F2 150 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 PLEKHA2Q9HB19 425 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 SIRT7Q9NRC8 400 aa9.16□□□□□ -0.94
SNX1-212ENST00000560861 TNCP24821 2201 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 BUB1B-PAK6H3BSN5 160 aa9.15□□□□□ -0.94
SNX1-212ENST00000560861 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms