RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 BEST4Q8NFU0 473 aa10.19□□□□□ -0.78
CTDSPL2-209ENST00000560620 RNF5Q99942 180 aa10.19□□□□□ -0.78
CTDSPL2-209ENST00000560620 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
CTDSPL2-209ENST00000560620 PLXNB1O43157 2135 aa10.19□□□□□ -0.78
CTDSPL2-209ENST00000560620 MEGF8Q7Z7M0 2845 aa10.19□□□□□ -0.78
CTDSPL2-209ENST00000560620 TRAV41A0A0B4J266 112 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 MEIS3P1A6NDR6 274 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 TRIM64CA6NLI5 447 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 G3V318 75 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 SLC25A17O43808 307 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 TUSC2O75896 110 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 ELANEP08246 267 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 PTHLHP12272 177 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 IGLL1P15814 213 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 CX3CL1P78423 397 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 FOXE3Q13461 319 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 TMEM69Q5SWH9 247 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 GVQW1Q8N7I0 195 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 BVESQ8NE79 360 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 OR13F1Q8NGS4 319 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 SLC25A46Q96AG3 418 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 HARBI1Q96MB7 349 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 AUNIPQ9H7T9 357 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 IFT46Q9NQC8 304 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 COMMD3Q9UBI1 195 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 OR2W1Q9Y3N9 320 aa10.18□□□□□ -0.78
CTDSPL2-209ENST00000560620 A0A1W2PN81 502 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 FCN1O00602 326 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 SHOXO15266 292 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 WIPF1O43516 503 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 IGHG4P01861 327 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 RRASP10301 218 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 SLC6A1P30531 599 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 CHRNA7P36544 502 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 CBX5P45973 191 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 GNB1P62873 340 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 TAGLNQ01995 201 aaKnown RBP10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 TMEM267Q0VDI3 215 aaPredicted RBP10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 ZNF660Q6AZW8 331 aaPredicted RBP10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 ZNF645Q8N7E2 425 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 ADTRPQ96IZ2 230 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 DUX3Q96PT4 197 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 DCUN1D5Q9BTE7 237 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 MRPS26Q9BYN8 205 aaKnown RBP10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 NECAP2Q9NVZ3 263 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 GAB2Q9UQC2 676 aa10.17□□□□□ -0.78
CTDSPL2-209ENST00000560620 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 XRCC3O43542 346 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 SLC22A5O76082 557 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 SPDEFO95238 335 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 CNIH1O95406 144 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 CA2P00918 260 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 SMIM18P0DKX4 95 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 LGALS7P47929 136 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 PDLIM3Q53GG5 364 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 GPR107Q5VW38 600 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 GRPEL2Q8TAA5 225 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 FAM103A1Q9BTL3 118 aaKnown RBP10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 MRPS7Q9Y2R9 242 aaKnown RBP10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 PRELID3BQ9Y3B1 194 aa10.16□□□□□ -0.78
CTDSPL2-209ENST00000560620 CCL24O00175 119 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 CRYZL1O95825 349 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 HLA-DQB1P01920 261 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 PRB2P02812 416 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 PSMB8P28062 276 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 CD40LGP29965 261 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 FCGR2CP31995 323 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 DUTP33316 252 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 MYCNOSP40205 109 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 RORCP51449 518 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 TAS2R20P59543 309 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 NDPQ00604 133 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 CFHR3Q02985 330 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 DEFB136Q30KP8 78 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 BEAN1Q3B7T3 259 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 OR2B11Q5JQS5 317 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 UNQ5815/PRO19632Q6UWF5 114 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 ZNF562Q6V9R5 426 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 KCTD9Q7L273 389 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 GPR141Q7Z602 305 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 MRPL41Q8IXM3 137 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 SECTM1Q8WVN6 248 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 TCTEX1D2Q8WW35 142 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 C5orf30Q96GV9 206 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 RCC1LQ96I51 464 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 OR5B12Q96R08 314 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 NAA50Q9GZZ1 169 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 ZNF580Q9UK33 172 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 FBXO7Q9Y3I1 522 aa10.15□□□□□ -0.78
CTDSPL2-209ENST00000560620 NOTCH1P46531 2555 aa10.15□□□□□ -0.79
CTDSPL2-209ENST00000560620 IGKV1D-13A0A0B4J2D9 117 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 LINC00473A8K010 186 aa10.14□□□□□ -0.79
CTDSPL2-209ENST00000560620 FAM25AB3EWG3 89 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms