RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 CCL28Q9NRJ3 127 aa12.33□□□□□ -0.44
LYSMD2-204ENST00000560491 WASHC3Q9Y3C0 194 aa12.33□□□□□ -0.44
LYSMD2-204ENST00000560491 V9GYH0 126 aa12.33□□□□□ -0.44
LYSMD2-204ENST00000560491 STAB1Q9NY15 2570 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 A0A1B0GUS0 222 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 A6NHS1 94 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 LINC00473A8K010 186 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 FGF16O43320 207 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 PEX14O75381 377 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 APOA2P02652 100 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 CD3DP04234 171 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 MC5RP33032 325 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 DUTP33316 252 aaKnown RBP12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 THBS3P49746 956 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 PROK1P58294 105 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 HERV-K104P61576 105 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 MRPS10P82664 201 aaKnown RBP12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 MMDQ15546 238 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 WFDC12Q8WWY7 111 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 GPHA2Q96T91 129 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 TINAGL1Q9GZM7 467 aaPredicted RBP12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 SLC5A7Q9GZV3 580 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 FXYD6Q9H0Q3 95 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 SLC35D1Q9NTN3 355 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 RABL2AQ9UBK7 228 aaPredicted RBP12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 RABL2BQ9UNT1 228 aa12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 RBMX2Q9Y388 322 aaKnown RBP12.32□□□□□ -0.44
LYSMD2-204ENST00000560491 TNFSF12O43508 249 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 IGKV1-16P04430 117 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 KRTAP10-3P60369 221 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 EIF4EBP1Q13541 118 aaPredicted RBP12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 ACTBL2Q562R1 376 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 DHRS11Q6UWP2 260 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 CCDC190Q86UF4 302 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 BVESQ8NE79 360 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 OR4D10Q8NGI6 311 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 OR6Q1Q8NGQ2 317 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 DDB2Q92466 427 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 TAS2R8Q9NYW2 309 aa12.31□□□□□ -0.44
LYSMD2-204ENST00000560491 NBR2O15453 112 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 SLC22A5O76082 557 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 TSPAN5P62079 268 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 RPL30P62888 115 aaKnown RBP12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 ZNF79Q15937 498 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 RNASE10Q5GAN6 216 aaKnown RBP12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 OR2B11Q5JQS5 317 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 ZNF818PQ6ZRF7 136 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 KCTD9Q7L273 389 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 KLHDC1Q8N7A1 406 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 TMEM229BQ8NBD8 167 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 LIN7CQ9NUP9 197 aaKnown RBP12.3□□□□□ -0.44
LYSMD2-204ENST00000560491 GSTZ1O43708 216 aaPredicted RBP12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 TAS2R19P59542 299 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 CNPY1Q3B7I2 92 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 PYDC2Q56P42 97 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 HIST2H2BDQ6DRA6 164 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 FAAP20Q6NZ36 180 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 NPBQ8NG41 125 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 ADTRPQ96IZ2 230 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 ZNF747Q9BV97 191 aa12.29□□□□□ -0.44
LYSMD2-204ENST00000560491 NDUFA3O95167 84 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 RAB3DO95716 219 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 CD74P04233 296 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 TBPP20226 339 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 RPS16P62249 146 aaKnown RBP12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 STEAP1BQ6NZ63 245 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 FLYWCH2Q96CP2 140 aaKnown RBP12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 HSD17B10Q99714 261 aaKnown RBP12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 HSPB9Q9BQS6 159 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 KIAA1456Q9P272 454 aa12.28□□□□□ -0.44
LYSMD2-204ENST00000560491 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 RRHO14718 337 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 FCGR3BO75015 233 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 CRYZL1O95825 349 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 IFNA6P05013 189 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 CSF1P09603 554 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 GNRHRP30968 328 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 ETV6P41212 452 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 TAGLNQ01995 201 aaKnown RBP12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 PSG5Q15238 335 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 MSMO1Q15800 293 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 SPANXN2Q5MJ10 180 aa12.27□□□□□ -0.45
LYSMD2-204ENST00000560491 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms