RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CRIP2P52943 208 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 LINC00205P59089 165 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 ZNF660Q6AZW8 331 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 CNIH2Q6PI25 160 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 ETV3LQ6ZN32 361 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 LINC00482Q8N8I6 264 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 FUNDC2Q9BWH2 189 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 ANXA10Q9UJ72 324 aa11.88□□□□□ -0.51
SNRPA1-210ENST00000560383 TRAV18A0A075B6X5 111 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 APOA2P02652 100 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 PSMB8P28062 276 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 CDX1P47902 265 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 TAGLNQ01995 201 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 PSG5Q15238 335 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 CXorf66Q5JRM2 361 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 MYOZ3Q8TDC0 251 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 SLC25A46Q96AG3 418 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 TSNAXQ99598 290 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 FBXL15Q9H469 300 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 AUNIPQ9H7T9 357 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 DIABLOQ9NR28 239 aa11.87□□□□□ -0.51
SNRPA1-210ENST00000560383 FCN1O00602 326 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 ATP6V0E1O15342 81 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 HLA-DQB1P01920 261 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 THBS3P49746 956 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 LSM3P62310 102 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 CX3CL1P78423 397 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 NDPQ00604 133 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 C18orf65Q6ZTR6 163 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 ZNF695Q8IW36 515 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 MINDY2Q8NBR6 621 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 DDB2Q92466 427 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 FLYWCH2Q96CP2 140 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 OR2W1Q9Y3N9 320 aa11.86□□□□□ -0.51
SNRPA1-210ENST00000560383 G3V318 75 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 XRCC3O43542 346 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 TUSC2O75896 110 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 IGLV1-40P01703 118 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 DUTP33316 252 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 MYCNOSP40205 109 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 LGALS7P47929 136 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 NCS1P62166 190 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 TMEM177Q53S58 311 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 UBE2NLQ5JXB2 153 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 C8orf86Q6ZUL3 223 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 MRPL41Q8IXM3 137 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 DPF1Q92782 380 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 S100A16Q96FQ6 103 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 ADTRPQ96IZ2 230 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 P2RX4Q99571 388 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 MCRIP2Q9BUT9 160 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 PARP11Q9NR21 331 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 RBM7Q9Y580 266 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-210ENST00000560383 TRAV41A0A0B4J266 112 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 K7EIL1 84 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 SLC22A5O76082 557 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 CRYGBP07316 175 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 RRASP10301 218 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 EGR2P11161 476 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 NFYAP23511 347 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 RPS16P62249 146 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 KIAA0141Q14154 515 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 ZNF645Q8N7E2 425 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 GVQW1Q8N7I0 195 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 KLHL30-AS1Q8NEE0 82 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 BEST4Q8NFU0 473 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 METTL1Q9UBP6 276 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 NUBP2Q9Y5Y2 271 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 WSB1Q9Y6I7 421 aa11.84□□□□□ -0.51
SNRPA1-210ENST00000560383 LINC00473A8K010 186 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 GABARAPO95166 117 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 IGLV2-14P01704 120 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 CBX5P45973 191 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 LUMP51884 338 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 VBP1P61758 197 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 PLGLAQ15195 96 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 ANKRD13BQ86YJ7 626 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 TCTEX1D1Q8N7M0 179 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 SAMD12Q8N8I0 201 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 CMTM3Q96MX0 182 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 KLK15Q9H2R5 256 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 DNAH9Q9NYC9 4486 aa11.83□□□□□ -0.52
SNRPA1-210ENST00000560383 IGKV1D-13A0A0B4J2D9 117 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 SRRM4A7MD48 611 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 SLC25A17O43808 307 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 IGKV1-13P0DP09 117 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 PTHLHP12272 177 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 KRTAP10-11P60412 298 aa11.82□□□□□ -0.52
SNRPA1-210ENST00000560383 SSBP2P81877 361 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms