RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SMIM18P0DKX4 95 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 CX3CL1P78423 397 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 PSG5Q15238 335 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 TMEM177Q53S58 311 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 OXLD1Q5BKU9 147 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 ZNF562Q6V9R5 426 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 LINC00482Q8N8I6 264 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 SLC25A46Q96AG3 418 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
SMAD3-213ENST00000560175 FBXL15Q9H469 300 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 AUNIPQ9H7T9 357 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 DIABLOQ9NR28 239 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 ANXA10Q9UJ72 324 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 OR2W1Q9Y3N9 320 aa10.33□□□□□ -0.76
SMAD3-213ENST00000560175 TGP01266 2768 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 G3V318 75 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 H7C2Y5 167 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 M0R1X1 148 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 PF4V1P10720 104 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 VDAC1P21796 283 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
SMAD3-213ENST00000560175 MYCNOSP40205 109 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 LGALS7P47929 136 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 GNG2P59768 71 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 NDPQ00604 133 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 EIF4EBP1Q13541 118 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-213ENST00000560175 CXorf66Q5JRM2 361 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-213ENST00000560175 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 C1QL4Q86Z23 238 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 FLYWCH2Q96CP2 140 aaKnown RBP10.32□□□□□ -0.76
SMAD3-213ENST00000560175 ADTRPQ96IZ2 230 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 CMTM3Q96MX0 182 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 TSNAXQ99598 290 aaKnown RBP10.32□□□□□ -0.76
SMAD3-213ENST00000560175 GINS4Q9BRT9 223 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 FBXO7Q9Y3I1 522 aa10.32□□□□□ -0.76
SMAD3-213ENST00000560175 TRAV41A0A0B4J266 112 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 SRRM4A7MD48 611 aaKnown RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 SLC22A5O76082 557 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 APOA2P02652 100 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 RRASP10301 218 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 LUMP51884 338 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 RPS16P62249 146 aaKnown RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 SSBP2P81877 361 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 RUNX1Q01196 453 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 UBE2NLQ5JXB2 153 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 ANKRD13BQ86YJ7 626 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 MRPL41Q8IXM3 137 aaKnown RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 TCTEX1D1Q8N7M0 179 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 S100A16Q96FQ6 103 aaKnown RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 RCC1LQ96I51 464 aaKnown RBP10.31□□□□□ -0.76
SMAD3-213ENST00000560175 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 SLC35D1Q9NTN3 355 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 ANAPC10Q9UM13 185 aa10.31□□□□□ -0.76
SMAD3-213ENST00000560175 LINC00473A8K010 186 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 SOX15O60248 233 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 DUS4LO95620 317 aaKnown RBP10.3□□□□□ -0.76
SMAD3-213ENST00000560175 PF4P02776 101 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 CD33P20138 364 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 ALDH3B2P48448 385 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 NCS1P62166 190 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 MSMO1Q15800 293 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 CTF1Q16619 201 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 MRGPRG-AS1Q2M3A8 158 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 LCNL1Q6ZST4 164 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 C8orf86Q6ZUL3 223 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 PPP1R27Q86WC6 154 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 GVQW1Q8N7I0 195 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 ZNF491Q8N8L2 437 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 BEST4Q8NFU0 473 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 RAX2Q96IS3 184 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 KLK15Q9H2R5 256 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 METTL1Q9UBP6 276 aaKnown RBP10.3□□□□□ -0.76
SMAD3-213ENST00000560175 WSB1Q9Y6I7 421 aa10.3□□□□□ -0.76
SMAD3-213ENST00000560175 IGKV1D-13A0A0B4J2D9 117 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 I3L521 148 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 CCL24O00175 119 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 GABARAPO95166 117 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 IGKV1-13P0DP09 117 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 IGLL1P15814 213 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 NAT1P18440 290 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 NFYAP23511 347 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-213ENST00000560175 CBX5P45973 191 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 RAB9AP51151 201 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 VBP1P61758 197 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 TMEM267Q0VDI3 215 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-213ENST00000560175 FHL3Q13643 280 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 KHDC1LQ5JSQ8 128 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 OVCH2Q7RTZ1 564 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 REC114Q7Z4M0 266 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 BVESQ8NE79 360 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 SNAPC3Q92966 411 aa10.29□□□□□ -0.76
SMAD3-213ENST00000560175 PARP11Q9NR21 331 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms