RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ZNF48Q96MX3 618 aaPredicted RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 MRPL20Q9BYC9 149 aaKnown RBP7.55□□□□□ -1.2
HERC1-206ENST00000559996 C20orf85Q9H1P6 137 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 PRDM13Q9H4Q3 707 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 YAE1D1Q9NRH1 226 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 SLC2A9Q9NRM0 540 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 COPZ2Q9P299 210 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 NUP50Q9UKX7 468 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 NUBP2Q9Y5Y2 271 aa7.55□□□□□ -1.2
HERC1-206ENST00000559996 TRAV6A0A075B6T7 132 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 IGHV1-3A0A0C4DH29 117 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 CRYM-AS1A6NIL9 109 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 LEUTXA8MZ59 168 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 IGKV1-39P01597 117 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 IGKV1D-39P04432 117 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 H2AFB2P0C5Z0 115 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 PGAM2P15259 253 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 EPHA1P21709 976 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 RAG2P55895 527 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 BPIFB3P59826 476 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 GPR157Q5UAW9 335 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 OR10X1Q8NGY0 326 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 NANPQ8TBE9 248 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 GLYATL2Q8WU03 294 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 GALNT14Q96FL9 552 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 TP53RKQ96S44 253 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 NUDT15Q9NV35 164 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 RBM7Q9Y580 266 aaKnown RBP7.54□□□□□ -1.2
HERC1-206ENST00000559996 HILPDAQ9Y5L2 63 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 TLN2Q9Y4G6 2542 aa7.54□□□□□ -1.2
HERC1-206ENST00000559996 MDFIC2A0A1B0GVS7 189 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 SRRM4A7MD48 611 aaKnown RBP7.53□□□□□ -1.2
HERC1-206ENST00000559996 INMT-MINDY4F8WBC2 141 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 H0YJW9 148 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 M0R1X1 148 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 RAMP3O60896 148 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 GAPDHP04406 335 aaKnown RBP7.53□□□□□ -1.2
HERC1-206ENST00000559996 OR4E1P0C645 316 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 F2RP25116 425 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 RAB13P51153 203 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 RAB25P57735 213 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 PPP1R1AQ13522 171 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 EBI3Q14213 229 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 TMEM187Q14656 261 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 SSX2Q16385 188 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 SP6Q3SY56 376 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 TMEM128Q5BJH2 165 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 CLEC9AQ6UXN8 241 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 Q6ZNX1 250 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 Q71RC1 249 aaPredicted RBP7.53□□□□□ -1.2
HERC1-206ENST00000559996 OR52B4Q8NGK2 314 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 LHFPL5Q8TAF8 219 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 ENKURQ8TC29 256 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 SCGB3A2Q96PL1 93 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 S1PR3Q99500 378 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 HSD17B10Q99714 261 aaKnown RBP7.53□□□□□ -1.2
HERC1-206ENST00000559996 BEX2Q9BXY8 128 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 BEX1Q9HBH7 125 aa7.53□□□□□ -1.2
HERC1-206ENST00000559996 CUBNO60494 3623 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 TEX13DA0A0J9YY54 714 aaPredicted RBP7.52□□□□□ -1.21
HERC1-206ENST00000559996 C3orf85A0A1B0GTC6 90 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 C9orf170A2RU37 121 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 VGLL3A8MV65 326 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 OOSP1A8MZH6 123 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 TIMM23O14925 209 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 SFT2D2O95562 160 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 IGKV1-16P04430 117 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 RLN1P04808 185 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 IL5P05113 134 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 IL6RP08887 468 aaPredicted RBP7.52□□□□□ -1.21
HERC1-206ENST00000559996 AKR1C4P17516 323 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 UCP1P25874 307 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 LGALS4P56470 323 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 MRGPRG-AS1Q2M3A8 158 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 ANKRD55Q3KP44 614 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 PLET1Q6UQ28 207 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 KCTD9Q7L273 389 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 TMED4Q7Z7H5 227 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 TGIF2LXQ8IUE1 241 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 OR8H3Q8N146 312 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 Q8N6K4 173 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 C22orf15Q8WYQ4 148 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 RPEQ96AT9 228 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 SEC22CQ9BRL7 303 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 NAA60Q9H7X0 242 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
HERC1-206ENST00000559996 PRR13Q9NZ81 148 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 C14orf166Q9Y224 244 aaKnown RBP7.52□□□□□ -1.21
HERC1-206ENST00000559996 AMMECR1Q9Y4X0 333 aaPredicted RBP7.52□□□□□ -1.21
HERC1-206ENST00000559996 MXRA5Q9NR99 2828 aa7.52□□□□□ -1.21
HERC1-206ENST00000559996 SONP18583 2426 aaKnown RBP7.52□□□□□ -1.21
HERC1-206ENST00000559996 C7orf66A4D0T2 115 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 PEX14O75381 377 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 CDS2O95674 445 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 OR5AC1P0C628 307 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms