RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SAA2-SAA4A0A096LPE2 208 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 CHST1O43916 411 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 KRASP01116 189 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 SAA2P0DJI9 122 aaPredicted RBP10.41□□□□□ -0.74
USP3-213ENST00000559711 KIR2DS2P43631 304 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 ERVFRD-1P60508 538 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 AVPI1Q5T686 147 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 C11orf42Q8N5U0 333 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 MAGT1Q9H0U3 335 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 ZC4H2Q9NQZ6 224 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 PRELID3BQ9Y3B1 194 aa10.41□□□□□ -0.74
USP3-213ENST00000559711 KLF2Q9Y5W3 355 aaPredicted RBP10.41□□□□□ -0.74
USP3-213ENST00000559711 A0A087X0M5 115 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 A0A1B0GX30 115 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 LINC00862A6NCI5 91 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 FAM90A26D6RGX4 464 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 TOR1AO14656 332 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 PPIHO43447 177 aaKnown RBP10.4□□□□□ -0.74
USP3-213ENST00000559711 SSSCA1O60232 199 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 FCGR3BO75015 233 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 C1QL1O75973 258 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 TMEM50AO95807 157 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 HPRT1P00492 218 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
USP3-213ENST00000559711 TPT1P13693 172 aaKnown RBP10.4□□□□□ -0.74
USP3-213ENST00000559711 G6PCP35575 357 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 THBS3P49746 956 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 GNG10P50151 68 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 RAB14P61106 215 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 MIDNQ504T8 468 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 BAP18Q8IXM2 172 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 LYG1Q8N1E2 194 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 OR8B3Q8NGG8 313 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 C8orf46Q8TAG6 207 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 NEIL1Q96FI4 390 aaPredicted RBP10.4□□□□□ -0.74
USP3-213ENST00000559711 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 OR8B2Q96RD0 313 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 S1PR3Q99500 378 aa10.4□□□□□ -0.74
USP3-213ENST00000559711 LYRM2Q9NU23 88 aaPredicted RBP10.4□□□□□ -0.74
USP3-213ENST00000559711 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 WRBO00258 174 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 GAPDHP04406 335 aaKnown RBP10.39□□□□□ -0.75
USP3-213ENST00000559711 PAX9P55771 341 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 VAMP2P63027 116 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
USP3-213ENST00000559711 RAB40CQ96S21 281 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 SPOCK3Q9BQ16 436 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 FBXL17Q9UF56 701 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 ZNF462Q96JM2 2506 aa10.39□□□□□ -0.75
USP3-213ENST00000559711 USP9XQ93008 2570 aaPredicted RBP10.38□□□□□ -0.75
USP3-213ENST00000559711 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 FAM90A9PA6NNJ1 464 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 OVOL3O00110 214 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 NMBP08949 121 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 RNF224P0DH78 156 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 IGHV1-8P0DP01 117 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 CDKN1AP38936 164 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 ARHGDIBP52566 201 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 EFNA4P52798 201 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 EIF5AP63241 154 aaKnown RBP10.38□□□□□ -0.75
USP3-213ENST00000559711 ZNF833PQ6ZTB9 187 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 TMEM252Q8N6L7 170 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 ZNF383Q8NA42 475 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 R3HDM4Q96D70 268 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 BSCL2Q96G97 398 aaPredicted RBP10.38□□□□□ -0.75
USP3-213ENST00000559711 SLC25A31Q9H0C2 315 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.38□□□□□ -0.75
USP3-213ENST00000559711 USF3Q68DE3 2245 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 FAM24AA6NFZ4 105 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 J3QR06 171 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 SYNGR2O43760 224 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 JTBO76095 146 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 RBP4P02753 201 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 TAS2R30P59541 319 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 EWSR1Q01844 656 aaKnown RBP eCLIP10.38□□□□□ -0.75
USP3-213ENST00000559711 AARDQ4LEZ3 155 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 RPL7L1Q6DKI1 246 aaKnown RBP10.38□□□□□ -0.75
USP3-213ENST00000559711 H2BFWTQ7Z2G1 175 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 LY6G5BQ8NDX9 201 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 OR4S2Q8NH73 311 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 IGFBPL1Q8WX77 278 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 SLC25A32Q9H2D1 315 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
USP3-213ENST00000559711 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 AUP1Q9Y679 476 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 WSB1Q9Y6I7 421 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 SESN1Q9Y6P5 492 aa10.38□□□□□ -0.75
USP3-213ENST00000559711 MYO18BQ8IUG5 2567 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 DCHS2Q6V1P9 2916 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 PPIAL4CA0A0B4J2A2 164 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 A0A1W2PPH5 198 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 IGSF23A1L1A6 192 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 NXPH3O95157 252 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 CT45A6P0DMU7 189 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 CT45A5P0DMU8 189 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 CT45A7P0DMV0 189 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms