RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 IGKV3D-7A0A0C4DH55 119 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 IGKV3OR2-268A0A0C4DH90 116 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 GOLGA8QA0A0J9YX86 632 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 GSTZ1O43708 216 aaPredicted RBP0.59□□□□□ -2.31
CASC4-210ENST00000559550 NDUFB2O95178 105 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 IGKV2D-40P01614 121 aaPredicted RBP0.59□□□□□ -2.31
CASC4-210ENST00000559550 UCHL1P09936 223 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 SYT1P21579 422 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 RBM11P57052 281 aaKnown RBP0.59□□□□□ -2.31
CASC4-210ENST00000559550 LGALS9BQ3B8N2 356 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 SLC36A2Q495M3 483 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 FBXO48Q5FWF7 155 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 RBM48Q5RL73 367 aaKnown RBP0.59□□□□□ -2.31
CASC4-210ENST00000559550 TMEM42Q69YG0 159 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 LCN8Q6JVE9 175 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 SLC13A5Q86YT5 568 aaPredicted RBP0.59□□□□□ -2.31
CASC4-210ENST00000559550 PPWD1Q96BP3 646 aaKnown RBP0.59□□□□□ -2.31
CASC4-210ENST00000559550 OR7D2Q96RA2 312 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 TTTY13Q9BZ97 58 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 C8orf4Q9NR00 106 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 NUP153P49790 1475 aaKnown RBP0.59□□□□□ -2.32
CASC4-210ENST00000559550 LOC100506127A0A0U1RQW1 187 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 LIN7AO14910 233 aaPredicted RBP0.58□□□□□ -2.32
CASC4-210ENST00000559550 NPYP01303 97 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 S100A9P06702 114 aaKnown RBP0.58□□□□□ -2.32
CASC4-210ENST00000559550 EXOC3L4Q17RC7 722 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 Q3ZCU0 254 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 FP248Q71RG6 208 aaPredicted RBP0.58□□□□□ -2.32
CASC4-210ENST00000559550 LRRC34Q8IZ02 419 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 BLIDQ8IZY5 108 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 OR1L8Q8NGR8 309 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 SFRP2Q96HF1 295 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 TMEM208Q9BTX3 173 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 EIF5A2Q9GZV4 153 aaKnown RBP0.58□□□□□ -2.32
CASC4-210ENST00000559550 TAAR3PQ9P1P4 343 aa0.58□□□□□ -2.32
CASC4-210ENST00000559550 POLR3HQ9Y535 204 aaPredicted RBP0.58□□□□□ -2.32
CASC4-210ENST00000559550 CHD2O14647 1828 aaKnown RBP0.57□□□□□ -2.32
CASC4-210ENST00000559550 GRIN2BQ13224 1484 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 M0R381 172 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 TXNDC9O14530 226 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 PLA2G10O15496 165 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 ADAP1O75689 374 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 CIAO1O76071 339 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 GRPRP30550 384 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 IFNGR2P38484 337 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 CTBP2P56545 445 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 SYCP1Q15431 976 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 KTN1-AS1Q86SY8 53 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 BAP18Q8IXM2 172 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 C15orf53Q8NAA6 179 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 SMIM12Q96EX1 92 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 NRBP2Q9NSY0 501 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.57□□□□□ -2.32
CASC4-210ENST00000559550 DLG5Q8TDM6 1919 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 TMEM94Q12767 1356 aa0.57□□□□□ -2.32
CASC4-210ENST00000559550 TECTAO75443 2155 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 INTS1Q8N201 2190 aaKnown RBP0.56□□□□□ -2.32
CASC4-210ENST00000559550 IGKV3-7A0A075B6H7 116 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 COPEO14579 308 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 CRPP02741 224 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 ATP5G1P05496 136 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 DEFA4P12838 97 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 PVALBP20472 110 aaPredicted RBP0.56□□□□□ -2.32
CASC4-210ENST00000559550 AKR1C3P42330 323 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 CRATP43155 626 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 GABRA2P47869 451 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 SNAP25P60880 206 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 HOXC5Q00444 222 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 SMAGPQ0VAQ4 97 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 C4orf26Q17RF5 130 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 TLCD1Q96CP7 247 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 CPNE2Q96FN4 548 aaPredicted RBP0.56□□□□□ -2.32
CASC4-210ENST00000559550 NMNAT3Q96T66 252 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 EMC3Q9P0I2 261 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 KLK5Q9Y337 293 aaPredicted RBP0.56□□□□□ -2.32
CASC4-210ENST00000559550 RBM7Q9Y580 266 aaKnown RBP0.56□□□□□ -2.32
CASC4-210ENST00000559550 BRWD1Q9NSI6 2320 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 REREQ9P2R6 1566 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 MAP3K19Q56UN5 1328 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 CHD5Q8TDI0 1954 aa0.56□□□□□ -2.32
CASC4-210ENST00000559550 A0A087WUU8 490 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 METTL15A6NJ78 407 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 GOLGA8RI6L899 631 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 KLRC4O43908 158 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 MRPS14O60783 128 aaKnown RBP0.55□□□□□ -2.32
CASC4-210ENST00000559550 RD3LP0DJH9 198 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 KDELR2P33947 212 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 RPL27AP46776 148 aaKnown RBP0.55□□□□□ -2.32
CASC4-210ENST00000559550 AQP4P55087 323 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 H2BFSP57053 126 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 HPCAP84074 193 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 GNA12Q03113 381 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 PLCXD2Q0VAA5 305 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 CDK5R1Q15078 307 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 MOGQ16653 247 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 AADACL4Q5VUY2 407 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 RIBC1Q8N443 379 aaPredicted RBP0.55□□□□□ -2.32
CASC4-210ENST00000559550 STOML3Q8TAV4 291 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 ZNF675Q8TD23 568 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 Q8WTZ3 238 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms