RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CTSDP07339 412 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 REG1BP48304 166 aa11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 TAGLNQ01995 201 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 ZDHHC22Q8N966 263 aa11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 MARCH1Q8TCQ1 289 aa11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 HSD17B10Q99714 261 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 FAM96BQ9Y3D0 163 aa11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 A6NDX4 124 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 NDUFB6O95139 128 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 IGHV4-59P01825 116 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 THBS3P49746 956 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 CCBE1Q6UXH8 406 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 SSMEM1Q8WWF3 244 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 ADTRPQ96IZ2 230 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 SSX3Q99909 188 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 SLC2A9Q9NRM0 540 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 TCF19Q9Y242 345 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
SNRPA1-207ENST00000559309 M0R1X1 148 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 RBFOX2O43251 390 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 BRS3P32247 399 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 MC5RP33032 325 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 RAB13P51153 203 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 MECP2P51608 486 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 CCR6P51684 374 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 DHODHQ02127 395 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 SLC9A3R2Q15599 337 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 SCGB2B2Q4G0G5 96 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 DRAXINQ8NBI3 349 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 DUSP18Q8NEJ0 188 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 ZFAND1Q8TCF1 268 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 PLSCR3Q9NRY6 295 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 MCUBQ9NWR8 336 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 RBM7Q9Y580 266 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 NBEAL1Q6ZS30 2694 aa11.85□□□□□ -0.51
SNRPA1-207ENST00000559309 CENPXA8MT69 81 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 H3BUX3 64 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 HOXA3O43365 443 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 INPP1P49441 399 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 ARHGDIBP52566 201 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 BAMBIQ13145 260 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 LIAT1Q6ZQX7 453 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 PDPNQ86YL7 162 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 EAF1Q96JC9 268 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 GPHA2Q96T91 129 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 RNF5Q99942 180 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 VPREB3Q9UKI3 123 aa11.84□□□□□ -0.51
SNRPA1-207ENST00000559309 DNAJC9-AS1A6NH13 148 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 IGKV1-16P04430 117 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 RNASE1P07998 156 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 SNRNP70P08621 437 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 VSIG10L2P0DP72 767 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 F2RP25116 425 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 KCTD9Q7L273 389 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 MOB3BQ86TA1 216 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 CMTM1Q8IZ96 169 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 ZNF418Q8TF45 676 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 RITA1Q96K30 269 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 DPAGT1Q9H3H5 408 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
SNRPA1-207ENST00000559309 IGHV3-72A0A0B4J1Y9 119 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 LINC00854A0A1B0GVQ3 168 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 CRYM-AS1A6NIL9 109 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 MPPED1O15442 326 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 OR2F2O95006 317 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 NDUFA3O95167 84 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 IGKV1D-33P01593 117 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 IGKV1-33P01594 117 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 IGLV2-23P01705 113 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 RRASP10301 218 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 PI3P19957 117 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 CD24P25063 80 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 PIGPP57054 158 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 SUPT4H1P63272 117 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 POU2AF1Q16633 256 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 ZNF585BQ52M93 769 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 DHRS7BQ6IAN0 325 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 C16orf82Q7Z2V1 217 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 CADM3Q8N126 398 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 NPBQ8NG41 125 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 OR2T10Q8NGZ9 312 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 RBMXL1Q96E39 390 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 RBM14Q96PK6 669 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 CHIAQ9BZP6 476 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 ALX4Q9H161 411 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
SNRPA1-207ENST00000559309 TNFSF12O43508 249 aa11.81□□□□□ -0.52
SNRPA1-207ENST00000559309 CHST1O43916 411 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms