RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ACTBL2Q562R1 376 aa13.8□□□□□ -0.2
TPM1-218ENST00000559281 C22orf42Q6IC83 251 aa13.8□□□□□ -0.2
TPM1-218ENST00000559281 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
TPM1-218ENST00000559281 ZNF383Q8NA42 475 aa13.8□□□□□ -0.2
TPM1-218ENST00000559281 SLC35D1Q9NTN3 355 aa13.8□□□□□ -0.2
TPM1-218ENST00000559281 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
TPM1-218ENST00000559281 RBM7Q9Y580 266 aaKnown RBP13.8□□□□□ -0.2
TPM1-218ENST00000559281 A0A075B6Q4 140 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 IGKV1-16P04430 117 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 GSTT2P0CG29 244 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 GSTT2BP0CG30 244 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 LGALS7P47929 136 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 SRSF7Q16629 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPM1-218ENST00000559281 C19orf54Q5BKX5 351 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 GINS4Q9BRT9 223 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 CABLES2Q9BTV7 478 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 YTHDF1Q9BYJ9 559 aaKnown RBP13.79□□□□□ -0.2
TPM1-218ENST00000559281 ATG5Q9H1Y0 275 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 SCOCQ9UIL1 159 aa13.79□□□□□ -0.2
TPM1-218ENST00000559281 TRBV6-7A0A0A0MS04 114 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 SHISA3A0PJX4 238 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 MFNGO00587 321 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 SOX15O60248 233 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 CA2P00918 260 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
TPM1-218ENST00000559281 PSMB9P28065 219 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 GNB1P62873 340 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 IGSF11Q5DX21 431 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 UBE2UQ5VVX9 321 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 LFNGQ8NES3 379 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 OR2D2Q9H210 308 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 SLA2Q9H6Q3 261 aa13.78□□□□□ -0.2
TPM1-218ENST00000559281 NOTOA8MTQ0 251 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 LINC01619G3V211 115 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 OVOL1O14753 267 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 SLC25A17O43808 307 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 CNIH1O95406 144 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 RRASP10301 218 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 FGF9P31371 208 aaPredicted RBP13.77□□□□□ -0.21
TPM1-218ENST00000559281 LINC00205P59089 165 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 FXYD3Q14802 87 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 Q6ZS49 121 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 TPRA1Q86W33 373 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 SPARTQ8N0X7 666 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 ARPC1AQ92747 370 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 FAM103A1Q9BTL3 118 aaKnown RBP13.77□□□□□ -0.21
TPM1-218ENST00000559281 SDHAF2Q9NX18 166 aa13.77□□□□□ -0.21
TPM1-218ENST00000559281 ZNF230Q9UIE0 474 aaPredicted RBP13.77□□□□□ -0.21
TPM1-218ENST00000559281 ARPC1BO15143 372 aaKnown RBP13.76□□□□□ -0.21
TPM1-218ENST00000559281 LGALS1P09382 135 aaKnown RBP13.76□□□□□ -0.21
TPM1-218ENST00000559281 NHLRC4P0CG21 123 aaPredicted RBP13.76□□□□□ -0.21
TPM1-218ENST00000559281 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
TPM1-218ENST00000559281 DCUN1D4Q92564 292 aa13.76□□□□□ -0.21
TPM1-218ENST00000559281 ADTRPQ96IZ2 230 aa13.76□□□□□ -0.21
TPM1-218ENST00000559281 TMEM68Q96MH6 324 aa13.76□□□□□ -0.21
TPM1-218ENST00000559281 TXNL4BQ9NX01 149 aaKnown RBP13.76□□□□□ -0.21
TPM1-218ENST00000559281 STUB1Q9UNE7 303 aa13.76□□□□□ -0.21
TPM1-218ENST00000559281 SSR3Q9UNL2 185 aa13.76□□□□□ -0.21
TPM1-218ENST00000559281 ZNF256Q9Y2P7 627 aaPredicted RBP13.76□□□□□ -0.21
TPM1-218ENST00000559281 A0A0B4J203 849 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 SCGNO76038 276 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 HSPB1P04792 205 aaKnown RBP13.75□□□□□ -0.21
TPM1-218ENST00000559281 CTXN2P0C2S0 81 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 DTYMKP23919 212 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 TPPP2P59282 170 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 ASPHD1Q5U4P2 390 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 CASTOR1Q8WTX7 329 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 MAFIPQ8WZ33 124 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 MS4A10Q96PG2 267 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 PRR25Q96S07 402 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.75□□□□□ -0.21
TPM1-218ENST00000559281 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
TPM1-218ENST00000559281 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
TPM1-218ENST00000559281 H3BUA1 57 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 SHOXO15266 292 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 TRGV3P03979 118 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 PITPNAQ00169 270 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 NR2C2APQ86WQ0 139 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
TPM1-218ENST00000559281 RHOVQ96L33 236 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 HARBI1Q96MB7 349 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 ST6GALNAC5Q9BVH7 336 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 ALX4Q9H161 411 aaPredicted RBP13.74□□□□□ -0.21
TPM1-218ENST00000559281 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 DNAH3Q8TD57 4116 aa13.74□□□□□ -0.21
TPM1-218ENST00000559281 A0A0G2JLM5 398 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 SAP30O75446 220 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 LY86O95711 162 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 TMEM177Q53S58 311 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 HACD4Q5VWC8 232 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 H1FOOQ8IZA3 346 aaPredicted RBP13.73□□□□□ -0.21
TPM1-218ENST00000559281 BVESQ8NE79 360 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 DAPK2Q9UIK4 370 aa13.73□□□□□ -0.21
TPM1-218ENST00000559281 IGHV4OR15-8A0A075B7B6 117 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms