RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ZNF774Q6NX45 483 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 RBMS3Q6XE24 437 aaKnown RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 LIAT1Q6ZQX7 453 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 Q6ZS49 121 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 COMMD2Q86X83 199 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 STX12Q86Y82 276 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 LINC00346Q8IVM7 164 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 FAM219AQ8IW50 185 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 SIGLECL1Q8N7X8 197 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 TMEM104Q8NE00 496 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 OR8B12Q8NGG6 310 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 OR10S1Q8NGN2 331 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 OR14K1Q8NGZ2 314 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 RNASE11Q8TAA1 199 aaKnown RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 RAB1CQ92928 201 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 DUX5Q96PT3 197 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 JMJD8Q96S16 334 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PFDN5Q99471 154 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 NICN1Q9BSH3 213 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 GGACTQ9BVM4 153 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PECRQ9BY49 303 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 GPR84Q9NQS5 396 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 IL36GQ9NZH8 169 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 RNF150Q9ULK6 438 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 LHFPL6Q9Y693 200 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PRKDCP78527 4128 aaKnown RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 FAM90A10PA6NDY2 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A18PA6NE21 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A16PA6NEW6 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 RBFOX3A6NFN3 312 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A20PA6NIJ5 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A8PA6NJQ4 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A7PA6NKC0 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A22PA8MWA6 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A12PA8MX19 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A5PA8MXJ8 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A23PA8MXZ1 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ZNF732B4DXR9 585 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 PPP1R2P9O14990 202 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 AGPAT2O15120 278 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 DFFBO76075 338 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 CST2P09228 141 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A15PP0C7V4 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A13PP0C7W8 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A14PP0C7W9 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM90A24PP0C7X0 464 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ZNF728P0DKX0 622 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 OR5H8P0DN80 308 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 NQO2P16083 231 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 GATA3P23771 443 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 PRTN3P24158 256 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 OTX1P32242 354 aaPredicted RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 GUCA1AP43080 201 aaPredicted RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 RND3P61587 244 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 PPP1CBP62140 327 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 PAX8Q06710 450 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ZNF154Q13106 437 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 SCGB2A2Q13296 93 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 PMS2P11Q13670 270 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 TMEM187Q14656 261 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 CNN3Q15417 329 aaKnown RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 ABCA11PQ4W5N1 156 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 KHDC3LQ587J8 217 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 OR2B11Q5JQS5 317 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ZNF506Q5JVG8 444 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 OTPQ5XKR4 325 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 C16orf54Q6UWD8 224 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ASCL4Q6XD76 172 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 FAM24BQ8N5W8 94 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ZNF283Q8N7M2 679 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 GJC3Q8NFK1 279 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 OR5R1Q8NH85 324 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 CD300LFQ8TDQ1 290 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 HPSE2Q8WWQ2 592 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 RTN4IP1Q8WWV3 396 aaPredicted RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 EDARADDQ8WWZ3 215 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 MAFIPQ8WZ33 124 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 IL22RA2Q969J5 263 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 SGK3Q96BR1 496 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 MOB3AQ96BX8 217 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 TVP23CQ96ET8 276 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 TIMD4Q96H15 378 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 Q96M66 194 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 NIPSNAP3BQ9BS92 247 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 ZNF2Q9BSG1 426 aaPredicted RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 ST6GALNAC5Q9BVH7 336 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 PATZ1Q9HBE1 687 aaKnown RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 PNRC2Q9NPJ4 139 aaKnown RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 LSM5Q9Y4Y9 91 aaKnown RBP4.86□□□□□ -1.63
USP3-212ENST00000559276 INSIG2Q9Y5U4 225 aa4.86□□□□□ -1.63
USP3-212ENST00000559276 IGKV1-9A0A0C4DH69 117 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 MDFIC2A0A1B0GVS7 189 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 hCG_1809904A0A1W2PP81 198 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 A0A1W2PR64 198 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 A0A1W2PRV1 198 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 TXNL1O43396 289 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 FOXH1O75593 365 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms