RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.31□□□□□ -2.2
GABPB1-209ENST00000559100 MARCOQ9UEW3 520 aaPredicted RBP1.31□□□□□ -2.2
GABPB1-209ENST00000559100 VPREB3Q9UKI3 123 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 MCTS1Q9ULC4 181 aaKnown RBP1.31□□□□□ -2.2
GABPB1-209ENST00000559100 R4GN34 69 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 SCN4AP35499 1836 aa1.31□□□□□ -2.2
GABPB1-209ENST00000559100 PLXNB3Q9ULL4 1909 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 THADAQ6YHU6 1953 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 IGKV1D-17A0A075B6S4 117 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 IGKV1D-37A0A075B6S9 117 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 IGKV2-24A0A0C4DH68 120 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 LOC102725191A0A1B0GVB3 256 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CLDN24A6NM45 220 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 RTL8CO15255 209 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 PSCAO43653 123 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 INAFM2P0DMQ5 153 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CD79AP11912 226 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CPMP14384 443 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 OPRM1P35372 400 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CD200P41217 278 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 SERPINB10P48595 397 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 MARCKSL1P49006 195 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 IDH3GP51553 393 aaPredicted RBP1.3□□□□□ -2.2
GABPB1-209ENST00000559100 KRTAP10-1P60331 282 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CTAG1AP78358 180 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 HOXC5Q00444 222 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 SRSF6Q13247 344 aaKnown RBP1.3□□□□□ -2.2
GABPB1-209ENST00000559100 DHRS2Q13268 280 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 OR2F1Q13607 317 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 HTR4Q13639 388 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 KRTAP25-1Q3LHN0 102 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 AKIRIN2Q53H80 203 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 IGFL3Q6UXB1 125 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 SCXQ7RTU7 201 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 GLT6D1Q7Z4J2 308 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 LYPD6Q86Y78 171 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 ZFAND2AQ8N6M9 145 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 PACRGLQ8N7B6 248 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CLDN22Q8N7P3 220 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 OR5B17Q8NGF7 314 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 CMTM2Q8TAZ6 248 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 LMX1AQ8TE12 382 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 ANKRD7Q92527 254 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 NMNAT3Q96T66 252 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 MND1Q9BWT6 205 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 NKX6-2Q9C056 277 aaPredicted RBP1.3□□□□□ -2.2
GABPB1-209ENST00000559100 MRPL16Q9NX20 251 aaKnown RBP1.3□□□□□ -2.2
GABPB1-209ENST00000559100 HHLA2Q9UM44 414 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 SLC22A13Q9Y226 551 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 ZNF443Q9Y2A4 671 aaPredicted RBP1.3□□□□□ -2.2
GABPB1-209ENST00000559100 ARL2BPQ9Y2Y0 163 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 MYO5BQ9ULV0 1848 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 KIF15Q9NS87 1388 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 TRIP11Q15643 1979 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 ADGRL1O94910 1474 aa1.3□□□□□ -2.2
GABPB1-209ENST00000559100 KIF26AQ9ULI4 1882 aaPredicted RBP1.29□□□□□ -2.2
GABPB1-209ENST00000559100 IGHV1-69-2A0A0G2JMI3 117 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 DHRS12A0PJE2 317 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 GRIFINA4D1Z8 144 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 VPS37CA5D8V6 355 aaPredicted RBP1.29□□□□□ -2.2
GABPB1-209ENST00000559100 OR6C6A6NF89 314 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 EEF1E1-BLOC1S5C9J1V9 151 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 PSMD12O00232 456 aaPredicted RBP1.29□□□□□ -2.2
GABPB1-209ENST00000559100 TXNDC9O14530 226 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 COX7A2LO14548 114 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 CNIH1O95406 144 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 SOD1P00441 154 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 IGLV6-57P01721 117 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 CTXN2P0C2S0 81 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 HRES1P13985 223 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 ALOX5APP20292 161 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 NPPCP23582 126 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 OR4D2P58180 307 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 TSPEAR-AS2P59090 65 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 RAB5BP61020 215 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 FGF12P61328 243 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 LSM6P62312 80 aaKnown RBP1.29□□□□□ -2.2
GABPB1-209ENST00000559100 ZNF117Q03924 483 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 PMAIP1Q13794 54 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 PLPPR5Q32ZL2 321 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 KRTAP13-2Q52LG2 175 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 FAM201AQ5SY85 155 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 C1orf194Q5T5A4 169 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 SFXN4Q6P4A7 337 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 C20orf196Q8IYI0 205 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 UMODL1-AS1Q8N2C9 162 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 TBC1D19Q8N5T2 526 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 DAND5Q8N907 189 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 LY6G5BQ8NDX9 201 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 OR5C1Q8NGR4 320 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 OR1L8Q8NGR8 309 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 OR13C8Q8NGS7 320 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 RPS4Y2Q8TD47 263 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 GPR119Q8TDV5 335 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 ACOT12Q8WYK0 555 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 SLC35B4Q969S0 331 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 GNPNAT1Q96EK6 184 aaPredicted RBP1.29□□□□□ -2.2
GABPB1-209ENST00000559100 CPNE2Q96FN4 548 aaPredicted RBP1.29□□□□□ -2.2
GABPB1-209ENST00000559100 CEP19Q96LK0 163 aa1.29□□□□□ -2.2
GABPB1-209ENST00000559100 CCL13Q99616 98 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms