RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 APOA2P02652 100 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 OR8U8P0C7N1 319 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 DGCR2P98153 550 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 PLGLAQ15195 96 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 MAFIPQ8WZ33 124 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
LRRC28-210ENST00000558879 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 SDHAF2Q9NX18 166 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 METTL1Q9UBP6 276 aaKnown RBP13.2□□□□□ -0.3
LRRC28-210ENST00000558879 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
LRRC28-210ENST00000558879 ZNF230Q9UIE0 474 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-210ENST00000558879 IGKV1D-8A0A087WSZ0 117 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 BET1O15155 118 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 RAMP3O60896 148 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 CA2P00918 260 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 DTYMKP23919 212 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-210ENST00000558879 ZNF616Q08AN1 781 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 ARL6IP1Q15041 203 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 ZNF773Q6PK81 442 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 OR10J5Q8NHC4 309 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 SLC35D1Q9NTN3 355 aa13.19□□□□□ -0.3
LRRC28-210ENST00000558879 ELF5Q9UKW6 265 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-210ENST00000558879 A0A075B6Q4 140 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 SEC14L6B5MCN3 397 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 OR8U9P0C7N5 309 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 DCTN2Q13561 401 aaKnown RBP13.18□□□□□ -0.3
LRRC28-210ENST00000558879 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 PYHIN1Q6K0P9 492 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-210ENST00000558879 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 FAM103A1Q9BTL3 118 aaKnown RBP13.18□□□□□ -0.3
LRRC28-210ENST00000558879 SCOCQ9UIL1 159 aa13.18□□□□□ -0.3
LRRC28-210ENST00000558879 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
LRRC28-210ENST00000558879 SLC25A17O43808 307 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 CRYGBP07316 175 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 LGALS1P09382 135 aaKnown RBP13.17□□□□□ -0.3
LRRC28-210ENST00000558879 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
LRRC28-210ENST00000558879 TMEM267Q0VDI3 215 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-210ENST00000558879 ARFRP1Q13795 201 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 SFXN4Q6P4A7 337 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 PPP1R27Q86WC6 154 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 OR1N2Q8NGR9 330 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 DDB2Q92466 427 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 ARPC1AQ92747 370 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 FLYWCH2Q96CP2 140 aaKnown RBP13.17□□□□□ -0.3
LRRC28-210ENST00000558879 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 ATG5Q9H1Y0 275 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 A3GALT2U3KPV4 340 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
LRRC28-210ENST00000558879 TMEM177Q53S58 311 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 ACTBL2Q562R1 376 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 DEFB121Q5J5C9 76 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 LFNGQ8NES3 379 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 LGALS14Q8TCE9 139 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 HARBI1Q96MB7 349 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 ALX4Q9H161 411 aaPredicted RBP13.16□□□□□ -0.3
LRRC28-210ENST00000558879 OR51E2Q9H255 320 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 SSR3Q9UNL2 185 aa13.16□□□□□ -0.3
LRRC28-210ENST00000558879 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
LRRC28-210ENST00000558879 INSL3P51460 131 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.3
LRRC28-210ENST00000558879 MRGPRG-AS1Q2M3A8 158 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 ZNF260Q3ZCT1 412 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 HACD4Q5VWC8 232 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 C11orf87Q6NUJ2 197 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 SLA2Q9H6Q3 261 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 DAPK2Q9UIK4 370 aa13.15□□□□□ -0.3
LRRC28-210ENST00000558879 RRP15Q9Y3B9 282 aaKnown RBP13.15□□□□□ -0.3
LRRC28-210ENST00000558879 LSM4Q9Y4Z0 139 aaKnown RBP13.15□□□□□ -0.3
LRRC28-210ENST00000558879 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 A0A087WW49 117 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 SCGNO76038 276 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 TALDO1P37837 337 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 LGALS7P47929 136 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 SCAND1P57086 179 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 FXYD3Q14802 87 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 CDNFQ49AH0 187 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 BVESQ8NE79 360 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 NUDCD2Q8WVJ2 157 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 DCUN1D4Q92564 292 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
LRRC28-210ENST00000558879 TMEM235A6NFC5 223 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 SRRM4A7MD48 611 aaKnown RBP13.13□□□□□ -0.31
LRRC28-210ENST00000558879 LINC00473A8K010 186 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 LINC01619G3V211 115 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 H3BUA1 57 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 OVOL1O14753 267 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 RRASP10301 218 aa13.13□□□□□ -0.31
LRRC28-210ENST00000558879 SDC2P34741 201 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms