RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 FOXA2Q9Y261 457 aaPredicted RBP6.27□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF256Q9Y2P7 627 aaPredicted RBP6.27□□□□□ -1.41
TRAF3-205ENST00000558700 WSB1Q9Y6I7 421 aa6.27□□□□□ -1.41
TRAF3-205ENST00000558700 A0A0A6YYD4 124 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 LOC102723971A0A1B0GUV8 181 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 HMX3A6NHT5 357 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 RAB27BO00194 218 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 LGALS1P09382 135 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 NHLRC4P0CG21 123 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 CD37P11049 281 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 CALRP27797 417 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 RPS25P62851 125 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 GNB1P62873 340 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 TMEM267Q0VDI3 215 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 TPBGQ13641 420 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 P2RY14Q15391 338 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF660Q6AZW8 331 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 GLDNQ6ZMI3 551 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 C5orf24Q7Z6I8 188 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 MINDY2Q8NBR6 621 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 OR1N2Q8NGR9 330 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 TMEM203Q969S6 136 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 RBMXL1Q96E39 390 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 ABHD14BQ96IU4 210 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 OR5B12Q96R08 314 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 TSNAXQ99598 290 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 RNF5Q99942 180 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 CMSS1Q9BQ75 279 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 HDHD3Q9BSH5 251 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 CCDC90BQ9GZT6 254 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 PARP12Q9H0J9 701 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 KLK15Q9H2R5 256 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 VCX3BQ9H321 246 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 FBXL15Q9H469 300 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 OR1A1Q9P1Q5 309 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 METTL1Q9UBP6 276 aaKnown RBP6.26□□□□□ -1.41
TRAF3-205ENST00000558700 AK3Q9UIJ7 227 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF221Q9UK13 617 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 A3GALT2U3KPV4 340 aa6.26□□□□□ -1.41
TRAF3-205ENST00000558700 PRSS29PA6NIE9 313 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 FOXI3A8MTJ6 420 aaPredicted RBP6.25□□□□□ -1.41
TRAF3-205ENST00000558700 B5MCH6 92 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 M0QYG6 137 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 OVOL1O14753 267 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 SOCS1O15524 211 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 TFAP2AP05549 437 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CT45A6P0DMU7 189 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CT45A5P0DMU8 189 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CT45A7P0DMV0 189 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 BTF3P20290 206 aaKnown RBP6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CD40LGP29965 261 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CEACAM6P40199 344 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 SERPINB10P48595 397 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 HSPA13P48723 471 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 VEGFCP49767 419 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 RAB9AP51151 201 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 RAP2BP61225 183 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CX3CL1P78423 397 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CBX3Q13185 183 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 TBCEQ15813 527 aaPredicted RBP6.25□□□□□ -1.41
TRAF3-205ENST00000558700 ASPHD1Q5U4P2 390 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 MZT2BQ6NZ67 158 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 CD200R1LQ6Q8B3 271 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 TMEM91Q6ZNR0 172 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF367Q7RTV3 350 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 PRSS48Q7RTY5 328 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF429Q86V71 674 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 PDPNQ86YL7 162 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 FAM89BQ8N5H3 189 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.25□□□□□ -1.41
TRAF3-205ENST00000558700 ARPC1AQ92747 370 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 PTX4Q96A99 478 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 FAM3DQ96BQ1 224 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 RITA1Q96K30 269 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 GFI1Q99684 422 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 AGMATQ9BSE5 352 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 PECRQ9BY49 303 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 DUSP21Q9H596 190 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 Q9N2K0 584 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 NKX1-2Q9UD57 310 aaPredicted RBP6.25□□□□□ -1.41
TRAF3-205ENST00000558700 BLOC1S6Q9UL45 172 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 AK6Q9Y3D8 172 aaKnown RBP6.25□□□□□ -1.41
TRAF3-205ENST00000558700 FBXO7Q9Y3I1 522 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 U3KQK5 164 aa6.25□□□□□ -1.41
TRAF3-205ENST00000558700 TRDCB7Z8K6 153 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 ANKRD65E5RJM6 399 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 LINC01619G3V211 115 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 ARPC1BO15143 372 aaKnown RBP6.24□□□□□ -1.41
TRAF3-205ENST00000558700 DENRO43583 198 aaKnown RBP6.24□□□□□ -1.41
TRAF3-205ENST00000558700 SOX15O60248 233 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 SAP30O75446 220 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 DIRAS3O95661 229 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 CA2P00918 260 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 CD3GP09693 182 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 OR8U9P0C7N5 309 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 GADD45AP24522 165 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 MYL9P24844 172 aa6.24□□□□□ -1.41
TRAF3-205ENST00000558700 PSMD7P51665 324 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms